RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PBDC1Q9BVG4 233 aa5.85□□□□□ -1.47
SMG6-211ENST00000572369 ZMAT4Q9H898 229 aa5.85□□□□□ -1.47
SMG6-211ENST00000572369 ZFAND3Q9H8U3 227 aa5.85□□□□□ -1.47
SMG6-211ENST00000572369 LSM5Q9Y4Y9 91 aaKnown RBP5.85□□□□□ -1.47
SMG6-211ENST00000572369 U3KQK5 164 aa5.85□□□□□ -1.47
SMG6-211ENST00000572369 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
SMG6-211ENST00000572369 INMT-MINDY4F8WBC2 141 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 TSPAN4O14817 238 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 PRAF2O60831 178 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 TOMM40O96008 361 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 IGKV1-17P01599 117 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 IL4P05112 153 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 IL5P05113 134 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 CD5P06127 495 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 HNRNPCP07910 306 aaKnown RBP eCLIP5.84□□□□□ -1.47
SMG6-211ENST00000572369 IGLC1P0CG04 106 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 PVALBP20472 110 aaPredicted RBP5.84□□□□□ -1.47
SMG6-211ENST00000572369 EIF2B2P49770 351 aaKnown RBP5.84□□□□□ -1.47
SMG6-211ENST00000572369 BCAP31P51572 246 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 S100A10P60903 97 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 GAMTQ14353 236 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 WFDC3Q8IUB2 231 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 GBGT1Q8N5D6 347 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 DEFB125Q8N687 156 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 OR51G1Q8NGK1 321 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 ST8SIA2Q92186 375 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 PPP1R14BQ96C90 147 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 C2orf50Q96LR7 162 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 RAB40CQ96S21 281 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 RNF2Q99496 336 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 SRD5A3Q9H8P0 318 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 UBQLN2Q9UHD9 624 aa5.84□□□□□ -1.47
SMG6-211ENST00000572369 RCL1Q9Y2P8 373 aaKnown RBP5.84□□□□□ -1.47
SMG6-211ENST00000572369 GOSR2O14653 212 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 SSNA1O43805 119 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 DFFBO76075 338 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 MBPP02686 304 aaPredicted RBP5.83□□□□□ -1.48
SMG6-211ENST00000572369 APOHP02749 345 aaPredicted RBP5.83□□□□□ -1.48
SMG6-211ENST00000572369 METTL15P1P0C7V9 234 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 PSG1P11464 419 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 LYZP61626 148 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 OR2F1Q13607 317 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 SBSPONQ8IVN8 264 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 OR10P1Q8NGE3 313 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 GATAD1Q8WUU5 269 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 SMIM8Q96KF7 97 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 WFDC10AQ9H1F0 79 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 MGAT4CQ9UBM8 478 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 PFDN2Q9UHV9 154 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 RABAC1Q9UI14 185 aa5.83□□□□□ -1.48
SMG6-211ENST00000572369 SNRPGP15A8MWD9 76 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 A8MZ25 164 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 K7EPK0 472 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 RLN2P04090 185 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 CRYBB3P26998 211 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 P2RY1P47900 373 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 CAV2P51636 162 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 CMC4P56277 68 aaPredicted RBP5.82□□□□□ -1.48
SMG6-211ENST00000572369 TAS2R30P59541 319 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 RRAS2P62070 204 aaPredicted RBP5.82□□□□□ -1.48
SMG6-211ENST00000572369 ZNF90Q03938 601 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 ACOT7LQ6ZUV0 252 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 BPIFCQ8NFQ6 507 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 STXBP6Q8NFX7 210 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 RNF125Q96EQ8 232 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 ZNF414Q96IQ9 312 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 TRGV9Q99603 122 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 VSIRQ9H7M9 311 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 C19orf73Q9NVV2 129 aa5.82□□□□□ -1.48
SMG6-211ENST00000572369 LOC102724200A0A096LPH7 203 aaPredicted RBP5.81□□□□□ -1.48
SMG6-211ENST00000572369 C7orf66A4D0T2 115 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 HELTA6NFD8 242 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 TSC22D2O75157 780 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 SIX6O95475 246 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 S100A7P31151 101 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 NUP62P37198 522 aaPredicted RBP5.81□□□□□ -1.48
SMG6-211ENST00000572369 AP2S1P53680 142 aaPredicted RBP5.81□□□□□ -1.48
SMG6-211ENST00000572369 PAX9P55771 341 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 DLK1P80370 383 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 USF2Q15853 346 aaPredicted RBP5.81□□□□□ -1.48
SMG6-211ENST00000572369 LILRB2Q8N423 598 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 MARVELD1Q9BSK0 173 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 MS4A6AQ9H2W1 248 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 NPVFQ9HCQ7 196 aa5.81□□□□□ -1.48
SMG6-211ENST00000572369 IGKV1D-37A0A075B6S9 117 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 FAM24AA6NFZ4 105 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 PRSS46E5RG02 174 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 CCNKO75909 580 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 CFDP00746 253 aaPredicted RBP5.8□□□□□ -1.48
SMG6-211ENST00000572369 ORM2P19652 201 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 CYCSP99999 105 aaKnown RBP5.8□□□□□ -1.48
SMG6-211ENST00000572369 RAB32Q13637 225 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 HAGHQ16775 308 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 LRRC37A5PQ49AS3 106 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 FAM90A2PQ658T7 463 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 C16orf54Q6UWD8 224 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 TMEM14EPQ6UXP3 125 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 TMEM144Q7Z5S9 345 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 STX12Q86Y82 276 aa5.8□□□□□ -1.48
SMG6-211ENST00000572369 APRG1Q8IVJ8 170 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms