RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 MAGT1Q9H0U3 335 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 HIPK2Q9H2X6 1198 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 NUDT15Q9NV35 164 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 U3KQ87 197 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 VPS13DQ5THJ4 4388 aa6.43□□□□□ -1.38
SMG6-210ENST00000572205 OR11H12B2RN74 326 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 SYNGR2O43760 224 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 UPK1BO75841 260 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 TNFRSF6BO95407 300 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 SLC25A4P12235 298 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 SUB1P53999 127 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMG6-210ENST00000572205 YPEL3P61236 119 aaPredicted RBP6.42□□□□□ -1.38
SMG6-210ENST00000572205 GUCA2BQ16661 112 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 GTSCR1Q86UQ5 136 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 THAP8Q8NA92 274 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 OR1S2Q8NGQ3 325 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 OR1S1Q8NH92 325 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 DCANP1Q8TF63 244 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 GLMPQ8WWB7 406 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 NPIPB3Q92617 1050 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 SEC22CQ9BRL7 303 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 SRD5A3Q9H8P0 318 aa6.42□□□□□ -1.38
SMG6-210ENST00000572205 H3BP45 60 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 CCSO14618 274 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 TOMM40O96008 361 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 OR10J1P30954 320 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 POLR2GP62487 172 aaKnown RBP eCLIP6.41□□□□□ -1.38
SMG6-210ENST00000572205 ZNF90Q03938 601 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 TMEM14EPQ6UXP3 125 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 TMEM182Q6ZP80 229 aaPredicted RBP6.41□□□□□ -1.38
SMG6-210ENST00000572205 ZBTB8BQ8NAP8 495 aaPredicted RBP6.41□□□□□ -1.38
SMG6-210ENST00000572205 MAP6D1Q9H9H5 199 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 ENY2Q9NPA8 101 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 CACFD1Q9UGQ2 172 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 UBQLN2Q9UHD9 624 aa6.41□□□□□ -1.38
SMG6-210ENST00000572205 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 TRAV6A0A075B6T7 132 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 TRAV14DV4A0A0A6YYC5 116 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 IGHV3-66A0A0C4DH42 116 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 RPS10-NUDT3A0A1W2PQS6 291 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 K7EQG2 157 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 DFFBO76075 338 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 IFNA10P01566 189 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 H2AFB2P0C5Z0 115 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 PSG1P11464 419 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 GPX4P36969 197 aaPredicted RBP6.4□□□□□ -1.38
SMG6-210ENST00000572205 ATP5IP56385 69 aaPredicted RBP6.4□□□□□ -1.38
SMG6-210ENST00000572205 ARL16Q0P5N6 197 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 C16orf54Q6UWD8 224 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 ACOT7LQ6ZUV0 252 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 ZNF431Q8TF32 576 aaPredicted RBP6.4□□□□□ -1.38
SMG6-210ENST00000572205 S100ZQ8WXG8 99 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 ACY3Q96HD9 319 aa6.4□□□□□ -1.38
SMG6-210ENST00000572205 KMT2AQ03164 3969 aa6.4□□□□□ -1.39
SMG6-210ENST00000572205 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 PIGBOS1A0A0B4J2F0 54 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 WRBO00258 174 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 SOCS3O14543 225 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 BUB3O43684 328 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 SSSCA1O60232 199 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 YIF1AO95070 293 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 MBPP02686 304 aaPredicted RBP6.39□□□□□ -1.39
SMG6-210ENST00000572205 GIG44P09565 113 aaPredicted RBP6.39□□□□□ -1.39
SMG6-210ENST00000572205 P2RY1P47900 373 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 TCF24Q7RTU0 167 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 NRARPQ7Z6K4 114 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 APRG1Q8IVJ8 170 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 COQ8AQ8NI60 647 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 TRGV9Q99603 122 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 SPATA25Q9BR10 227 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 GINS3Q9BRX5 216 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 MS4A6AQ9H2W1 248 aa6.39□□□□□ -1.39
SMG6-210ENST00000572205 C7orf66A4D0T2 115 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 OR4C46A6NHA9 309 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 CENPXA8MT69 81 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 IL4P05112 153 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 IL5P05113 134 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 NKX2-1P43699 371 aaPredicted RBP6.38□□□□□ -1.39
SMG6-210ENST00000572205 INPP1P49441 399 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 EWSR1Q01844 656 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMG6-210ENST00000572205 ZNF846Q147U1 533 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 IAH1Q2TAA2 248 aaPredicted RBP6.38□□□□□ -1.39
SMG6-210ENST00000572205 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 GSG1LQ6UXU4 331 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 RBPMS2Q6ZRY4 209 aaKnown RBP6.38□□□□□ -1.39
SMG6-210ENST00000572205 RNF125Q96EQ8 232 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 SMIM8Q96KF7 97 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
SMG6-210ENST00000572205 OVOL2Q9BRP0 275 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 GGTLC1Q9BX51 225 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 BATF3Q9NR55 127 aa6.38□□□□□ -1.39
SMG6-210ENST00000572205 EPPK1P58107 5090 aaKnown RBP6.38□□□□□ -1.39
SMG6-210ENST00000572205 FRAS1Q86XX4 4008 aa6.37□□□□□ -1.39
SMG6-210ENST00000572205 PRSS29PA6NIE9 313 aa6.37□□□□□ -1.39
SMG6-210ENST00000572205 K7EPK0 472 aa6.37□□□□□ -1.39
SMG6-210ENST00000572205 TSC22D2O75157 780 aa6.37□□□□□ -1.39
SMG6-210ENST00000572205 MED6O75586 246 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms