RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CCR6P51684 374 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 DEFB131AP59861 70 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 SMCO1Q147U7 214 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 PYDC2Q56P42 97 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 NMSQ5H8A3 153 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 LEMD1Q68G75 181 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 ETFRF1Q6IPR1 90 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 LGI3Q8N145 548 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 Q8WTZ3 238 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 GATAD1Q8WUU5 269 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 SHPKQ9UHJ6 478 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 ALMS1Q8TCU4 4167 aa9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 PLECQ15149 4684 aaKnown RBP9.1□□□□□ -0.95
CTDNEP1-205ENST00000570828 S100A5P33763 92 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 SUPT4H1P63272 117 aaKnown RBP9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 EWSR1Q01844 656 aaKnown RBP eCLIP9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 KLF9Q13886 244 aaPredicted RBP9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 LYZL2Q7Z4W2 148 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 TMED4Q7Z7H5 227 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 TOMM5Q8N4H5 51 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 DTD1Q8TEA8 209 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 ACY3Q96HD9 319 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 U3KQ87 197 aa9.09□□□□□ -0.95
CTDNEP1-205ENST00000570828 HELTA6NFD8 242 aa9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 YPEL3P61236 119 aaPredicted RBP9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 STHQ8IWL8 128 aa9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 OR1S1Q8NH92 325 aa9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 TMEM170AQ8WVE7 144 aa9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 NPIPB3Q92617 1050 aa9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 RARRES2Q99969 163 aa9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 V9GYH0 126 aa9.08□□□□□ -0.96
CTDNEP1-205ENST00000570828 DUXBA0A1W2PPF3 345 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 K7EQG2 157 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 IFNA4P05014 189 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 IL4P05112 153 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 ZNF688P0C7X2 276 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 RBMS2Q15434 407 aaKnown RBP9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 TMEM128Q5BJH2 165 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 OR11H2Q8NH07 326 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 RBKSQ9H477 322 aa9.07□□□□□ -0.96
CTDNEP1-205ENST00000570828 TOMM40O96008 361 aa9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 RD3LP0DJH9 198 aa9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 AP2S1P53680 142 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 DHRS2Q13268 280 aa9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 USF2Q15853 346 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 CEMP1Q6PRD7 247 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 DCANP1Q8TF63 244 aa9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 DEDD2Q8WXF8 326 aa9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 LINC00476Q8WZB0 136 aa9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 SLC25A21Q9BQT8 299 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 KLK5Q9Y337 293 aaPredicted RBP9.06□□□□□ -0.96
CTDNEP1-205ENST00000570828 ATP5IP56385 69 aaPredicted RBP9.05□□□□□ -0.96
CTDNEP1-205ENST00000570828 ZNF79Q15937 498 aa9.05□□□□□ -0.96
CTDNEP1-205ENST00000570828 SPANXN2Q5MJ10 180 aa9.05□□□□□ -0.96
CTDNEP1-205ENST00000570828 GLMPQ8WWB7 406 aa9.05□□□□□ -0.96
CTDNEP1-205ENST00000570828 SLC35E1Q96K37 410 aa9.05□□□□□ -0.96
CTDNEP1-205ENST00000570828 C11orf68Q9H3H3 251 aaKnown RBP9.05□□□□□ -0.96
CTDNEP1-205ENST00000570828 U3KQE9 123 aa9.05□□□□□ -0.96
CTDNEP1-205ENST00000570828 ZFP92A6NM28 416 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 KNCNA6PVL3 124 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 LY6G6CO95867 125 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 SPP1P10451 314 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 NUP62P37198 522 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 TMEM41BQ5BJD5 291 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 ACTL10Q5JWF8 245 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 MORN3Q6PF18 240 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 TRPT1Q86TN4 253 aaKnown RBP9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 CCDC190Q86UF4 302 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 OR51G1Q8NGK1 321 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 PHLDA1Q8WV24 401 aaPredicted RBP9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 RNF125Q96EQ8 232 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 PBDC1Q9BVG4 233 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 MFFQ9GZY8 342 aa9.04□□□□□ -0.96
CTDNEP1-205ENST00000570828 FAM90A26D6RGX4 464 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 RGS13O14921 159 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 FABP1P07148 127 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 IAPPP10997 89 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 PSG1P11464 419 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 SLC25A6P12236 298 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 GPX4P36969 197 aaPredicted RBP9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 INPP1P49441 399 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 RAB11AP62491 216 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 ID3Q02535 119 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 PPP1R1AQ13522 171 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 SIGLEC15Q6ZMC9 328 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 CENPSQ8N2Z9 138 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 LRTM2Q8N967 370 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 C11orf45Q8TAV5 145 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 RBM38Q9H0Z9 239 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 NRN1Q9NPD7 142 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 BATF3Q9NR55 127 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 PAIP2BQ9ULR5 123 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 TMED3Q9Y3Q3 217 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 HYDINQ4G0P3 5121 aa9.03□□□□□ -0.96
CTDNEP1-205ENST00000570828 ZNF701M0R085 212 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms