RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TRGV9Q99603 122 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 GINS3Q9BRX5 216 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 PBDC1Q9BVG4 233 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 PARD6GQ9BYG4 376 aaPredicted RBP5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 WDR61Q9GZS3 305 aaKnown RBP5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 KLK9Q9UKQ9 250 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 SVEP1Q4LDE5 3571 aa5.1□□□□□ -1.59
CTDNEP1-204ENST00000570484 PPP5D1E7EU14 171 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 BMPR1BO00238 502 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 COX7A2P2O60397 106 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 TSPAN15O95858 294 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 TOMM40O96008 361 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 CFDP00746 253 aaPredicted RBP5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 HSPB1P04792 205 aaKnown RBP5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 IL4P05112 153 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 CLEC3BP05452 202 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 LINC00869P0C866 280 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 IGLC1P0CG04 106 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 RD3LP0DJH9 198 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 BMI1P35226 326 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 ELLP55199 621 aaPredicted RBP5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 YPEL3P61236 119 aaPredicted RBP5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 B2MP61769 119 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 RUNX1Q01196 453 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 MLANAQ16655 118 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 DEFB136Q30KP8 78 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 LGALSLQ3ZCW2 172 aaPredicted RBP5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 FAM106AQ4KMX7 169 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 TCTEX1D4Q5JR98 221 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 AKR1C8PQ5T2L2 129 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 ZNF600Q6ZNG1 722 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 BAP18Q8IXM2 172 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 STPG3Q8N7X2 389 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 THAP8Q8NA92 274 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 OR51G1Q8NGK1 321 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 STOML3Q8TAV4 291 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 WIPF2Q8TF74 440 aaPredicted RBP5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 Q8WTZ3 238 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 PFDN5Q99471 154 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 MGST2Q99735 147 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 RSG1Q9BU20 258 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 C20orf24Q9BUV8 137 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 GGTLC1Q9BX51 225 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 WFDC1Q9HC57 220 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 MRPL36Q9P0J6 103 aaKnown RBP5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 PFDN2Q9UHV9 154 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 TIMM9Q9Y5J7 89 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 PXMP4Q9Y6I8 212 aa5.09□□□□□ -1.59
CTDNEP1-204ENST00000570484 IGHV4OR15-8A0A075B7B6 117 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 A0A087WW49 117 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGHV3-35A0A0C4DH35 117 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 ZNF320A2RRD8 509 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 I3L521 148 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 M0QZ24 198 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 NDUFA4O00483 81 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 TRBV12-3P01733 135 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 MBP02144 154 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR5G3P0C626 314 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 ATP6V0CP27449 155 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 HOXD3P31249 432 aaPredicted RBP5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 ZNF90Q03938 601 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 ACOT6Q3I5F7 207 aaPredicted RBP5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 FFAR4Q5NUL3 377 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 PXDC1Q5TGL8 231 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 MIC13Q5XKP0 118 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 TMEM182Q6ZP80 229 aaPredicted RBP5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 C1QL4Q86Z23 238 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR11H1Q8NG94 326 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR4F17Q8NGA8 305 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR1L4Q8NGR5 311 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR1B1Q8NGR6 318 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR1N2Q8NGR9 330 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR2G3Q8NGZ4 309 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 ST8SIA2Q92186 375 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 RNF125Q96EQ8 232 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR4F4Q96R69 305 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 PSMG3Q9BT73 122 aaPredicted RBP5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 CHRDL1Q9BU40 450 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 SH3BGRL3Q9H299 93 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 SLC25A32Q9H2D1 315 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 SLC39A9Q9NUM3 307 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 DOK5Q9P104 306 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 PEMTQ9UBM1 199 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 RNF24Q9Y225 148 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 UFC1Q9Y3C8 167 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 LSM4Q9Y4Z0 139 aaKnown RBP5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 PUS1Q9Y606 427 aaKnown RBP eCLIP5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 MTORP42345 2549 aa5.08□□□□□ -1.6
CTDNEP1-204ENST00000570484 ANK3Q12955 4377 aaKnown RBP5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGKV1D-37A0A075B6S9 117 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGKV1OR2-108A0A075B7D4 117 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 CCL24O00175 119 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 OR2C1O95371 312 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 IFNA7P01567 189 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 IGKV1-17P01599 117 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 CTSGP08311 255 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 PSG1P11464 419 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 ORM2P19652 201 aa5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 RPL29P47914 159 aaKnown RBP5.07□□□□□ -1.6
CTDNEP1-204ENST00000570484 SERF2P84101 59 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms