RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GAMTQ14353 236 aa12.47□□□□□ -0.41
MAP1LC3B-208ENST00000570189 OR51G1Q8NGK1 321 aa12.47□□□□□ -0.41
MAP1LC3B-208ENST00000570189 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
MAP1LC3B-208ENST00000570189 KLK5Q9Y337 293 aaPredicted RBP12.47□□□□□ -0.41
MAP1LC3B-208ENST00000570189 IGKV1D-37A0A075B6S9 117 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 SFT2D2O95562 160 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 PMS2P11Q13670 270 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 TMED4Q7Z7H5 227 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 RNF125Q96EQ8 232 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 CIB3Q96Q77 187 aaPredicted RBP12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 SRRQ9GZT4 340 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 MFFQ9GZY8 342 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 NRN1Q9NPD7 142 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 PFDN2Q9UHV9 154 aa12.46□□□□□ -0.41
MAP1LC3B-208ENST00000570189 CCDC160A6NGH7 325 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 MED6O75586 246 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 IFNA4P05014 189 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 ZNF688P0C7X2 276 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 DHRS2Q13268 280 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 PPP1R1AQ13522 171 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 SPANXN2Q5MJ10 180 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 CENPSQ8N2Z9 138 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 SLC35E1Q96K37 410 aa12.45□□□□□ -0.42
MAP1LC3B-208ENST00000570189 NAP1L6A6NFF2 107 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 ZNF705EA8MWA4 302 aaPredicted RBP12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 PRSS46E5RG02 174 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 FABP1P07148 127 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 VAMP1P23763 118 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 RAB11AP62491 216 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 C1orf194Q5T5A4 169 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 Q8NAQ8 132 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 PHLDA1Q8WV24 401 aaPredicted RBP12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 TRGV9Q99603 122 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 HRH4Q9H3N8 390 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 BIRC6Q9NR09 4857 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 KMT2AQ03164 3969 aa12.44□□□□□ -0.42
MAP1LC3B-208ENST00000570189 RPP30P78346 268 aaKnown RBP12.43□□□□□ -0.42
MAP1LC3B-208ENST00000570189 THAP8Q8NA92 274 aa12.43□□□□□ -0.42
MAP1LC3B-208ENST00000570189 CSNK1G2-AS1Q8NCQ2 148 aa12.43□□□□□ -0.42
MAP1LC3B-208ENST00000570189 RAB40CQ96S21 281 aa12.43□□□□□ -0.42
MAP1LC3B-208ENST00000570189 ZFP92A6NM28 416 aa12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 SYNGR2O43760 224 aa12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 CFDP00746 253 aaPredicted RBP12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 MIFP14174 115 aa12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 C4BPBP20851 252 aa12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 C11orf45Q8TAV5 145 aa12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 FBXL17Q9UF56 701 aa12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 SLC45A2Q9UMX9 530 aa12.42□□□□□ -0.42
MAP1LC3B-208ENST00000570189 IGKV1OR2-108A0A075B7D4 117 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 NDUFB6O95139 128 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 TCTAP57738 103 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 ZNF90Q03938 601 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 PSMG4Q5JS54 123 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 ACTL10Q5JWF8 245 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 CLUHP3Q96NS8 147 aa12.41□□□□□ -0.42
MAP1LC3B-208ENST00000570189 SNRPGP15A8MWD9 76 aa12.4□□□□□ -0.42
MAP1LC3B-208ENST00000570189 GGNBP1Q5YKI7 109 aa12.4□□□□□ -0.42
MAP1LC3B-208ENST00000570189 C7orf50Q9BRJ6 194 aaKnown RBP12.4□□□□□ -0.42
MAP1LC3B-208ENST00000570189 C1QTNF4Q9BXJ3 329 aa12.4□□□□□ -0.42
MAP1LC3B-208ENST00000570189 X6R8D5 127 aa12.4□□□□□ -0.42
MAP1LC3B-208ENST00000570189 C9orf170A2RU37 121 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 H3BMM0 161 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 IAPPP10997 89 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 HLA-DRB4P13762 266 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 NANOS2P60321 138 aaKnown RBP12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 NUTF2P61970 127 aaKnown RBP12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 ID3Q02535 119 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 BAK1Q16611 211 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 CNPY1Q3B7I2 92 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 SAMD13Q5VXD3 122 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 LGALS9CQ6DKI2 356 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 SDHCQ99643 169 aaPredicted RBP12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 HLA-DRB4X5D2U9 266 aa12.39□□□□□ -0.43
MAP1LC3B-208ENST00000570189 C11orf94C9JXX5 98 aa12.38□□□□□ -0.43
MAP1LC3B-208ENST00000570189 SOCS3O14543 225 aa12.38□□□□□ -0.43
MAP1LC3B-208ENST00000570189 LY6G6CO95867 125 aa12.38□□□□□ -0.43
MAP1LC3B-208ENST00000570189 HOXB5P09067 269 aa12.38□□□□□ -0.43
MAP1LC3B-208ENST00000570189 PSMB3P49720 205 aa12.38□□□□□ -0.43
MAP1LC3B-208ENST00000570189 TRIQKQ629K1 86 aa12.38□□□□□ -0.43
MAP1LC3B-208ENST00000570189 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
MAP1LC3B-208ENST00000570189 IGHV4-28A0A0C4DH34 117 aa12.37□□□□□ -0.43
MAP1LC3B-208ENST00000570189 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
MAP1LC3B-208ENST00000570189 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
MAP1LC3B-208ENST00000570189 BTCP35070 178 aa12.37□□□□□ -0.43
MAP1LC3B-208ENST00000570189 RBMY1FQ15415 496 aaKnown RBP12.37□□□□□ -0.43
MAP1LC3B-208ENST00000570189 SPATA31B1PQ5VZV4 182 aa12.37□□□□□ -0.43
MAP1LC3B-208ENST00000570189 TBC1D24Q9ULP9 559 aa12.37□□□□□ -0.43
MAP1LC3B-208ENST00000570189 WRBO00258 174 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 ISLRO14498 428 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 ID1P41134 155 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 INPP1P49441 399 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 MEOX2P50222 304 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 LYZP61626 148 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 FOXI2Q6ZQN5 318 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 OR4D5Q8NGN0 318 aa12.36□□□□□ -0.43
MAP1LC3B-208ENST00000570189 COQ8AQ8NI60 647 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms