RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 K7EQG2 157 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 LYL1P12980 280 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 RPL35AP18077 110 aaKnown RBP9.62□□□□□ -0.87
CNOT1-220ENST00000569916 NKX2-1P43699 371 aaPredicted RBP9.62□□□□□ -0.87
CNOT1-220ENST00000569916 RPP30P78346 268 aaKnown RBP9.62□□□□□ -0.87
CNOT1-220ENST00000569916 ZNF90Q03938 601 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 SPANXN5Q5MJ07 72 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 KIR2DL5AQ8N109 375 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 STXBP6Q8NFX7 210 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 OR51G1Q8NGK1 321 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 KIR2DL5BQ8NHK3 375 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 S100ZQ8WXG8 99 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 RNF125Q96EQ8 232 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 GRAMD2BQ96HH9 432 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 NUDT15Q9NV35 164 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 RABAC1Q9UI14 185 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 TBC1D24Q9ULP9 559 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 CSMD3Q7Z407 3707 aa9.62□□□□□ -0.87
CNOT1-220ENST00000569916 RYR3Q15413 4870 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 TRAV6A0A075B6T7 132 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 UBE2CO00762 179 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 SSSCA1O60232 199 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 DEFB131AP59861 70 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 DEFB135Q30KP9 77 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 Q6ZWC4 215 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 DCANP1Q8TF63 244 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 TRGV9Q99603 122 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 PTTG2Q9NZH5 202 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
CNOT1-220ENST00000569916 STRAPQ9Y3F4 350 aaKnown RBP9.61□□□□□ -0.87
CNOT1-220ENST00000569916 DYNC2H1Q8NCM8 4307 aaKnown RBP9.61□□□□□ -0.87
CNOT1-220ENST00000569916 HELTA6NFD8 242 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 BUB3O43684 328 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 ASAH1Q13510 395 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 IAH1Q2TAA2 248 aaPredicted RBP9.6□□□□□ -0.87
CNOT1-220ENST00000569916 LEMD1Q68G75 181 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 ZFAND6Q6FIF0 208 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 ACOT7LQ6ZUV0 252 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 STPG3Q8N7X2 389 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 ZBTB8BQ8NAP8 495 aaPredicted RBP9.6□□□□□ -0.87
CNOT1-220ENST00000569916 SEC22CQ9BRL7 303 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 PBDC1Q9BVG4 233 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 PSENENQ9NZ42 101 aa9.6□□□□□ -0.87
CNOT1-220ENST00000569916 RCL1Q9Y2P8 373 aaKnown RBP9.6□□□□□ -0.87
CNOT1-220ENST00000569916 PMS2P5A8MQ11 134 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 CCSO14618 274 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 SCGB1D2O95969 90 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 FABP1P07148 127 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 H2AFB2P0C5Z0 115 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 ZNF688P0C7X2 276 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 EIF2B2P49770 351 aaKnown RBP9.59□□□□□ -0.87
CNOT1-220ENST00000569916 PAX9P55771 341 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 OR2F1Q13607 317 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 ZNF431Q8TF32 576 aaPredicted RBP9.59□□□□□ -0.87
CNOT1-220ENST00000569916 RNF183Q96D59 192 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 SMIM8Q96KF7 97 aa9.59□□□□□ -0.87
CNOT1-220ENST00000569916 WDR12Q9GZL7 423 aaKnown RBP9.59□□□□□ -0.87
CNOT1-220ENST00000569916 FAM240BA0A1B0GVZ2 78 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 SPRY2O43597 315 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 UPK1BO75841 260 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 CCNKO75909 580 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 NUP62P37198 522 aaPredicted RBP9.58□□□□□ -0.88
CNOT1-220ENST00000569916 AP2S1P53680 142 aaPredicted RBP9.58□□□□□ -0.88
CNOT1-220ENST00000569916 LYZP61626 148 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 ZNF846Q147U1 533 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 TMEM14EPQ6UXP3 125 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 SIGLEC15Q6ZMC9 328 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
CNOT1-220ENST00000569916 SNRPGP15A8MWD9 76 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 MBPP02686 304 aaPredicted RBP9.57□□□□□ -0.88
CNOT1-220ENST00000569916 IFITM3Q01628 133 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 AKR1C1Q04828 323 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 MZT2BQ6NZ67 158 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 TMEM144Q7Z5S9 345 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 RAB40CQ96S21 281 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 CSTL1Q9H114 145 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 NRN1Q9NPD7 142 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 AGRNO00468 2067 aa9.57□□□□□ -0.88
CNOT1-220ENST00000569916 TSC22D2O75157 780 aa9.56□□□□□ -0.88
CNOT1-220ENST00000569916 METTL15P1P0C7V9 234 aa9.56□□□□□ -0.88
CNOT1-220ENST00000569916 TAS2R30P59541 319 aa9.56□□□□□ -0.88
CNOT1-220ENST00000569916 TMEM182Q6ZP80 229 aaPredicted RBP9.56□□□□□ -0.88
CNOT1-220ENST00000569916 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
CNOT1-220ENST00000569916 C12orf45Q8N5I9 185 aaPredicted RBP9.56□□□□□ -0.88
CNOT1-220ENST00000569916 PFDN2Q9UHV9 154 aa9.56□□□□□ -0.88
CNOT1-220ENST00000569916 A0A0J9YWU9 116 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 SMCO3A2RU48 225 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 C7orf66A4D0T2 115 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 FAM25EA8MYX2 175 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 CFDP00746 253 aaPredicted RBP9.55□□□□□ -0.88
CNOT1-220ENST00000569916 CA1P00915 261 aaPredicted RBP9.55□□□□□ -0.88
CNOT1-220ENST00000569916 GATA2P23769 480 aaPredicted RBP9.55□□□□□ -0.88
CNOT1-220ENST00000569916 DLK1P80370 383 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 PSMG4Q5JS54 123 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 C1orf194Q5T5A4 169 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 STHQ8IWL8 128 aa9.55□□□□□ -0.88
CNOT1-220ENST00000569916 BPIFCQ8NFQ6 507 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms