RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 C1orf134Q5TEV5 83 aa8.55□□□□□ -1.04
CAPN3-220ENST00000569827 SELENOHQ8IZQ5 122 aaKnown RBP8.55□□□□□ -1.04
CAPN3-220ENST00000569827 CCDC71LQ8N9Z2 235 aa8.55□□□□□ -1.04
CAPN3-220ENST00000569827 YTHDF2Q9Y5A9 579 aaKnown RBP8.55□□□□□ -1.04
CAPN3-220ENST00000569827 LOC102723971A0A1B0GUV8 181 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 C16orf90A8MZG2 172 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 ATG12O94817 140 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 RD3LP0DJH9 198 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 NKX2-1P43699 371 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-220ENST00000569827 ZNF90Q03938 601 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 C1orf158Q8N1D5 194 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 GLYATL2Q8WU03 294 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 RNF125Q96EQ8 232 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 NEU1Q99519 415 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 C7orf50Q9BRJ6 194 aaKnown RBP8.54□□□□□ -1.04
CAPN3-220ENST00000569827 TMEM222Q9H0R3 208 aa8.54□□□□□ -1.04
CAPN3-220ENST00000569827 SAV1Q9H4B6 383 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-220ENST00000569827 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.54□□□□□ -1.04
CAPN3-220ENST00000569827 PRB4P10163 310 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-220ENST00000569827 SLC25A4P12235 298 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 LYZP61626 148 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 OR2F1Q13607 317 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 TMEM268Q5VZI3 342 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 ARRDC1Q8N5I2 433 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 MAPKAPK5-AS1Q8N8E1 139 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 COQ8AQ8NI60 647 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 RNASEH2CQ8TDP1 164 aaKnown RBP8.53□□□□□ -1.04
CAPN3-220ENST00000569827 C20orf173Q96LM9 149 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 ABHD1Q96SE0 405 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 RTBDNQ9BSG5 229 aaPredicted RBP8.53□□□□□ -1.04
CAPN3-220ENST00000569827 FUNDC2Q9BWH2 189 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 EXTL2Q9UBQ6 330 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 MTFP1Q9UDX5 166 aa8.53□□□□□ -1.04
CAPN3-220ENST00000569827 TEX13DA0A0J9YY54 714 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-220ENST00000569827 TMEM189A5PLL7 270 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 SOCS3O14543 225 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 GSTZ1O43708 216 aaPredicted RBP8.52□□□□□ -1.05
CAPN3-220ENST00000569827 CDS2O95674 445 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 RAB3DO95716 219 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 HBE1P02100 147 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 DAD1P61803 113 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 AARDQ4LEZ3 155 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 SOHLH1Q5JUK2 328 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 FAM78BQ5VT40 261 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 FOXI2Q6ZQN5 318 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 OR52E5Q8NH55 327 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 TERB2Q8NHR7 220 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 ZFAND1Q8TCF1 268 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 RBPMSQ93062 196 aaKnown RBP8.52□□□□□ -1.05
CAPN3-220ENST00000569827 NAA50Q9GZZ1 169 aaKnown RBP8.52□□□□□ -1.05
CAPN3-220ENST00000569827 NAA60Q9H7X0 242 aa8.52□□□□□ -1.05
CAPN3-220ENST00000569827 IGKV1D-37A0A075B6S9 117 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 SMIM9A6NGZ8 99 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 TNFAIP8O95379 198 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 ZNF79Q15937 498 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 NMSQ5H8A3 153 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 IGFL4Q6B9Z1 124 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 STEAP1BQ6NZ63 245 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 C14orf166Q9Y224 244 aaKnown RBP8.51□□□□□ -1.05
CAPN3-220ENST00000569827 GOLT1BQ9Y3E0 138 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 TMED3Q9Y3Q3 217 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 HERC1Q15751 4861 aa8.51□□□□□ -1.05
CAPN3-220ENST00000569827 ZFP92A6NM28 416 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 ZNF705GA8MUZ8 300 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-220ENST00000569827 ID1P41134 155 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 PSMB3P49720 205 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 TAS2R19P59542 299 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 PSG9Q00887 426 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 FCN2Q15485 313 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 RRN3P1Q2M238 152 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 RNF212Q495C1 297 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 ETFRF1Q6IPR1 90 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 FAM219AQ8IW50 185 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 TMEM229BQ8NBD8 167 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 PPP1R14BQ96C90 147 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 ATG101Q9BSB4 218 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 MAGT1Q9H0U3 335 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 RBKSQ9H477 322 aa8.5□□□□□ -1.05
CAPN3-220ENST00000569827 SEPSECSQ9HD40 501 aaKnown RBP8.5□□□□□ -1.05
CAPN3-220ENST00000569827 FAT1Q14517 4588 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 A0A0J9YX75 114 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 M0R2Z0 102 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 SULT1A3P0DMM9 295 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 SULT1A4P0DMN0 295 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 GAMTQ14353 236 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 GPR107Q5VW38 600 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 FAM210BQ96KR6 192 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 TMEM208Q9BTX3 173 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 VCX3AQ9NNX9 186 aa8.49□□□□□ -1.05
CAPN3-220ENST00000569827 A0A087WXM4 84 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 TEX48A0A1B0GUV7 120 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 CRYM-AS1A6NIL9 109 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 NUDT3O95989 172 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 TBPP20226 339 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 SUPT4H1P63272 117 aaKnown RBP8.48□□□□□ -1.05
CAPN3-220ENST00000569827 KLF9Q13886 244 aaPredicted RBP8.48□□□□□ -1.05
CAPN3-220ENST00000569827 SPINK13Q1W4C9 94 aa8.48□□□□□ -1.05
CAPN3-220ENST00000569827 EBLN2Q6P2I7 272 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms