RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 HIST1H2BBP33778 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 CDKN1AP38936 164 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 RPL35P42766 123 aaKnown RBP4.26□□□□□ -1.73
SF3B3-213ENST00000569687 MEOX2P50222 304 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 PDLIM4P50479 330 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 FAM3BP58499 235 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BDP58876 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BCP62807 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 PRB3Q04118 309 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-213ENST00000569687 PAX8Q06710 450 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 FABP9Q0Z7S8 132 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 FXYD3Q14802 87 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST2H2BEQ16778 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 KHDC1LQ5JSQ8 128 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.26□□□□□ -1.73
SF3B3-213ENST00000569687 TEX38Q6PEX7 206 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 KCNIP4Q6PIL6 250 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 LHFPL4Q7Z7J7 247 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 DYNAPQ8N1N2 210 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 OR5AU1Q8NGC0 362 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 OR10G8Q8NGN5 311 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 FRZBQ92765 325 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BHQ93079 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 MISP3Q96FF7 219 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BNQ99877 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H2BMQ99879 126 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 PAXXQ9BUH6 204 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 DERL1Q9BUN8 251 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 ELOVL1Q9BW60 279 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 UBTD1Q9HAC8 227 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 LPAR2Q9HBW0 351 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 OSTCQ9NRP0 149 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF355PQ9NSJ1 428 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 C1RLQ9NZP8 487 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 MRPL27Q9P0M9 148 aaKnown RBP4.26□□□□□ -1.73
SF3B3-213ENST00000569687 TMEM14CQ9P0S9 112 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 CDC42EP3Q9UKI2 254 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 RNF24Q9Y225 148 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 KLF12Q9Y4X4 402 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 COL6A6A6NMZ7 2263 aa4.26□□□□□ -1.73
SF3B3-213ENST00000569687 UBR5O95071 2799 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-213ENST00000569687 HRNRQ86YZ3 2850 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-213ENST00000569687 IGLV11-55A0A075B6I3 123 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 GGTLC3B5MD39 225 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 PPP5D1E7EU14 171 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 ISLRO14498 428 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 OR7C2O60412 319 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 TOX4O94842 621 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 IGKV1-17P01599 117 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 IGLV2-8P01709 118 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 TRGC1P0CF51 173 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 RD3LP0DJH9 198 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 EGR2P11161 476 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-213ENST00000569687 PAX1P15863 534 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 CRYBB3P26998 211 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 FCGR2BP31994 310 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-213ENST00000569687 BRS3P32247 399 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 GNG4P50150 75 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 AKR1D1P51857 326 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 NDUFA6P56556 154 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 YPEL3P61236 119 aaPredicted RBP4.25□□□□□ -1.73
SF3B3-213ENST00000569687 RPL15P61313 204 aaKnown RBP4.25□□□□□ -1.73
SF3B3-213ENST00000569687 CX3CL1P78423 397 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 SRSF1Q07955 248 aaKnown RBP eCLIP4.25□□□□□ -1.739e-6■□□□□ 8.7
SF3B3-213ENST00000569687 KLRD1Q13241 179 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 MMDQ15546 238 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 MORN5Q5VZ52 161 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 RUSC1-AS1Q66K80 236 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 LINC00305Q7Z4B0 112 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 SMIM12Q96EX1 92 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 TMEM68Q96MH6 324 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 TBX15Q96SF7 602 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 TXN2Q99757 166 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 IL36BQ9NZH7 164 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 PITPNC1Q9UKF7 332 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 HILPDAQ9Y5L2 63 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 VPS13CQ709C8 3753 aa4.25□□□□□ -1.73
SF3B3-213ENST00000569687 DCHS2Q6V1P9 2916 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 TRBV6-1A0A0K0K1D8 114 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 MDFIC2A0A1B0GVS7 189 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 A0A1W2PRD5 423 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 A0A1W2PRF3 423 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 A0A1W2PRM7 423 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 WI2-2373I1.2A0A1W2PRP0 233 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 IFITM10A6NMD0 228 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 K7EN84 100 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 TOMM40O96008 361 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 IGHV3-48P01763 117 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 IGHV4-39P01824 125 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 HLA-DRB1P01911 266 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 NBEAP1P0C6P0 100 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H1EP10412 219 aaKnown RBP4.24□□□□□ -1.73
SF3B3-213ENST00000569687 PSG1P11464 419 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 HIST1H1BP16401 226 aaKnown RBP4.24□□□□□ -1.73
SF3B3-213ENST00000569687 ORM2P19652 201 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 MFAP4P55083 255 aa4.24□□□□□ -1.73
SF3B3-213ENST00000569687 UBE2L3P68036 154 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms