RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 APOC4P55056 127 aa12.25□□□□□ -0.45
EDC3-216ENST00000569561 POLR2GP62487 172 aaKnown RBP eCLIP12.25□□□□□ -0.45
EDC3-216ENST00000569561 ZNF90Q03938 601 aa12.25□□□□□ -0.45
EDC3-216ENST00000569561 C4orf46Q504U0 113 aa12.25□□□□□ -0.45
EDC3-216ENST00000569561 SLC35E1Q96K37 410 aa12.25□□□□□ -0.45
EDC3-216ENST00000569561 TBC1D24Q9ULP9 559 aa12.25□□□□□ -0.45
EDC3-216ENST00000569561 PMS2P5A8MQ11 134 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 BUB3O43684 328 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 TCRBP04435 133 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 RPL35AP18077 110 aaKnown RBP12.24□□□□□ -0.45
EDC3-216ENST00000569561 RAB11AP62491 216 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 STPG3Q8N7X2 389 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 OR51G1Q8NGK1 321 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 RNF125Q96EQ8 232 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 GRAMD2BQ96HH9 432 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 TRGV9Q99603 122 aa12.24□□□□□ -0.45
EDC3-216ENST00000569561 PLECQ15149 4684 aaKnown RBP12.23□□□□□ -0.45
EDC3-216ENST00000569561 DNASE2O00115 360 aaPredicted RBP12.23□□□□□ -0.45
EDC3-216ENST00000569561 PAX9P55771 341 aa12.23□□□□□ -0.45
EDC3-216ENST00000569561 DEFB131AP59861 70 aa12.23□□□□□ -0.45
EDC3-216ENST00000569561 RNF183Q96D59 192 aa12.23□□□□□ -0.45
EDC3-216ENST00000569561 NARS2Q96I59 477 aaKnown RBP12.23□□□□□ -0.45
EDC3-216ENST00000569561 DNAH1Q9P2D7 4330 aa12.23□□□□□ -0.45
EDC3-216ENST00000569561 ZFP92A6NM28 416 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 H3BP45 60 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 IFNA21P01568 189 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 NKX2-1P43699 371 aaPredicted RBP12.22□□□□□ -0.45
EDC3-216ENST00000569561 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
EDC3-216ENST00000569561 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 SPANXN5Q5MJ07 72 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 ZFAND6Q6FIF0 208 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 OR8G2PQ6IF36 304 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 STXBP6Q8NFX7 210 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 NUDT15Q9NV35 164 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 RABAC1Q9UI14 185 aa12.22□□□□□ -0.45
EDC3-216ENST00000569561 RCL1Q9Y2P8 373 aaKnown RBP12.22□□□□□ -0.45
EDC3-216ENST00000569561 HELTA6NFD8 242 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 SPRY2O43597 315 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 EIF2B2P49770 351 aaKnown RBP12.21□□□□□ -0.45
EDC3-216ENST00000569561 RPL11P62913 178 aaKnown RBP12.21□□□□□ -0.45
EDC3-216ENST00000569561 IAH1Q2TAA2 248 aaPredicted RBP12.21□□□□□ -0.45
EDC3-216ENST00000569561 LEMD1Q68G75 181 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 TMEM14EPQ6UXP3 125 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 ACOT7LQ6ZUV0 252 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 ZBTB8BQ8NAP8 495 aaPredicted RBP12.21□□□□□ -0.45
EDC3-216ENST00000569561 S100ZQ8WXG8 99 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 SMIM8Q96KF7 97 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 PTTG2Q9NZH5 202 aa12.21□□□□□ -0.45
EDC3-216ENST00000569561 STRAPQ9Y3F4 350 aaKnown RBP12.21□□□□□ -0.45
EDC3-216ENST00000569561 TRAV6A0A075B6T7 132 aa12.2□□□□□ -0.46
EDC3-216ENST00000569561 ASAH1Q13510 395 aa12.2□□□□□ -0.46
EDC3-216ENST00000569561 ZNF431Q8TF32 576 aaPredicted RBP12.2□□□□□ -0.46
EDC3-216ENST00000569561 SEC22CQ9BRL7 303 aa12.2□□□□□ -0.46
EDC3-216ENST00000569561 CSTL1Q9H114 145 aa12.2□□□□□ -0.46
EDC3-216ENST00000569561 PAIP2BQ9ULR5 123 aaKnown RBP12.2□□□□□ -0.46
EDC3-216ENST00000569561 TENM2Q9NT68 2774 aa12.19□□□□□ -0.46
EDC3-216ENST00000569561 SSSCA1O60232 199 aa12.19□□□□□ -0.46
EDC3-216ENST00000569561 CCNKO75909 580 aa12.19□□□□□ -0.46
EDC3-216ENST00000569561 GIG44P09565 113 aaPredicted RBP12.19□□□□□ -0.46
EDC3-216ENST00000569561 ZNF688P0C7X2 276 aa12.19□□□□□ -0.46
EDC3-216ENST00000569561 AP2S1P53680 142 aaPredicted RBP12.19□□□□□ -0.46
EDC3-216ENST00000569561 IFITM3Q01628 133 aa12.19□□□□□ -0.46
EDC3-216ENST00000569561 TMEM182Q6ZP80 229 aaPredicted RBP12.19□□□□□ -0.46
EDC3-216ENST00000569561 TRPT1Q86TN4 253 aaKnown RBP12.19□□□□□ -0.46
EDC3-216ENST00000569561 SEPSECSQ9HD40 501 aaKnown RBP12.19□□□□□ -0.46
EDC3-216ENST00000569561 PSENENQ9NZ42 101 aa12.19□□□□□ -0.46
EDC3-216ENST00000569561 CCSO14618 274 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 MBPP02686 304 aaPredicted RBP12.18□□□□□ -0.46
EDC3-216ENST00000569561 FABP1P07148 127 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 TAS2R30P59541 319 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 LYZP61626 148 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
EDC3-216ENST00000569561 OR2F1Q13607 317 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 SIGLEC15Q6ZMC9 328 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 TMEM144Q7Z5S9 345 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 PBDC1Q9BVG4 233 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 C11orf1Q9H5F2 150 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 NRN1Q9NPD7 142 aa12.18□□□□□ -0.46
EDC3-216ENST00000569561 ALMS1Q8TCU4 4167 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 SNRPGP15A8MWD9 76 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 SOCS3O14543 225 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 TSC22D2O75157 780 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 UPK1BO75841 260 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 H2AFB2P0C5Z0 115 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
EDC3-216ENST00000569561 C1orf194Q5T5A4 169 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 RAB40CQ96S21 281 aa12.17□□□□□ -0.46
EDC3-216ENST00000569561 WDR12Q9GZL7 423 aaKnown RBP12.17□□□□□ -0.46
EDC3-216ENST00000569561 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 FAM240BA0A1B0GVZ2 78 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 FNDC10F2Z333 226 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 CFDP00746 253 aaPredicted RBP12.16□□□□□ -0.46
EDC3-216ENST00000569561 ATF4P18848 351 aaPredicted RBP12.16□□□□□ -0.46
EDC3-216ENST00000569561 DLK1P80370 383 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 IL15RAQ13261 267 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 IL17DQ8TAD2 202 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 GATAD1Q8WUU5 269 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 C17orf77Q96MU5 243 aa12.16□□□□□ -0.46
EDC3-216ENST00000569561 SLC45A2Q9UMX9 530 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms