RNA–Protein interactions for RNA: ENST00000569390.1

NEIL1-222, Transcript of nei like DNA glycosylase 1, human

TSL 3

Gene NEIL1, Length 346 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-222	ENST00000569390	NUPR2	A6NF83	97 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	CENPX	A8MT69	81 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	NDUFB6	O95139	128 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	CA1	P00915	261 aa	Predicted RBP	13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	DHRS2	Q13268	280 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	GAMT	Q14353	236 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	OR8G2P	Q6IF36	304 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	RNF125	Q96EQ8	232 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	RARRES2	Q99969	163 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	C7orf50	Q9BRJ6	194 aa	Known RBP	13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	SEPSECS	Q9HD40	501 aa	Known RBP	13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	NDUFA13	Q9P0J0	144 aa		13.74	□□□□□ -0.21
NEIL1-222	ENST00000569390	BUB3	O43684	328 aa		13.73	□□□□□ -0.21
NEIL1-222	ENST00000569390	SYNGR2	O43760	224 aa		13.73	□□□□□ -0.21
NEIL1-222	ENST00000569390	ZNF688	P0C7X2	276 aa		13.73	□□□□□ -0.21
NEIL1-222	ENST00000569390	BAK1	Q16611	211 aa		13.73	□□□□□ -0.21
NEIL1-222	ENST00000569390	MORN3	Q6PF18	240 aa	Predicted RBP	13.73	□□□□□ -0.21
NEIL1-222	ENST00000569390	HOXB5	P09067	269 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	SPP1	P10451	314 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	IAPP	P10997	89 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	SNRPD3	P62318	126 aa	Known RBP	13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	CNPY1	Q3B7I2	92 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	GGNBP1	Q5YKI7	109 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	COQ8A	Q8NI60	647 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	NRN1	Q9NPD7	142 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	DNAH1	Q9P2D7	4330 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	LYST	Q99698	3801 aa		13.72	□□□□□ -0.21
NEIL1-222	ENST00000569390	C9orf170	A2RU37	121 aa		13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	CFD	P00746	253 aa	Predicted RBP	13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	PMS2P11	Q13670	270 aa		13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	SIGLEC15	Q6ZMC9	328 aa		13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	TRPT1	Q86TN4	253 aa	Known RBP	13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	OR11H2	Q8NH07	326 aa		13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	TRGV9	Q99603	122 aa		13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	PBDC1	Q9BVG4	233 aa		13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	C11orf68	Q9H3H3	251 aa	Known RBP	13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	PAIP2B	Q9ULR5	123 aa	Known RBP	13.71	□□□□□ -0.21
NEIL1-222	ENST00000569390	SNRPGP15	A8MWD9	76 aa		13.7	□□□□□ -0.22
NEIL1-222	ENST00000569390	IFNA21	P01568	189 aa		13.7	□□□□□ -0.22
NEIL1-222	ENST00000569390	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
NEIL1-222	ENST00000569390	FBXL17	Q9UF56	701 aa		13.7	□□□□□ -0.22
NEIL1-222	ENST00000569390	KLK5	Q9Y337	293 aa	Predicted RBP	13.7	□□□□□ -0.22
NEIL1-222	ENST00000569390	IGKV1D-37	A0A075B6S9	117 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	WRB	O00258	174 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	ZNF90	Q03938	601 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	PSMG4	Q5JS54	123 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	C1orf194	Q5T5A4	169 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	THAP8	Q8NA92	274 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	MFF	Q9GZY8	342 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	MAGT1	Q9H0U3	335 aa		13.69	□□□□□ -0.22
NEIL1-222	ENST00000569390	PLEC	Q15149	4684 aa	Known RBP	13.68	□□□□□ -0.22
NEIL1-222	ENST00000569390	OR4E1	P0C645	316 aa		13.68	□□□□□ -0.22
NEIL1-222	ENST00000569390	ACTL10	Q5JWF8	245 aa		13.68	□□□□□ -0.22
NEIL1-222	ENST00000569390	SDHC	Q99643	169 aa	Predicted RBP	13.68	□□□□□ -0.22
NEIL1-222	ENST00000569390	STRAP	Q9Y3F4	350 aa	Known RBP	13.68	□□□□□ -0.22
NEIL1-222	ENST00000569390	KNCN	A6PVL3	124 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	IL7	P13232	177 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	S100A7	P31151	101 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	LYZ	P61626	148 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	ID3	Q02535	119 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	C4orf46	Q504U0	113 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	SPANXN5	Q5MJ07	72 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	RAB40C	Q96S21	281 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	FLVCR2	Q9UPI3	526 aa		13.67	□□□□□ -0.22
NEIL1-222	ENST00000569390	LINC00854	A0A1B0GVQ3	168 aa		13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	PRSS46	E5RG02	174 aa		13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	ADAP1	O75689	374 aa		13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	NKX2-1	P43699	371 aa	Predicted RBP	13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	NUTF2	P61970	127 aa	Known RBP	13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	SAMD13	Q5VXD3	122 aa		13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	PPP1R14B	Q96C90	147 aa		13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	SLC45A2	Q9UMX9	530 aa		13.66	□□□□□ -0.22
NEIL1-222	ENST00000569390	IGKV1OR2-108	A0A075B7D4	117 aa		13.65	□□□□□ -0.22
NEIL1-222	ENST00000569390	BTC	P35070	178 aa		13.65	□□□□□ -0.22
NEIL1-222	ENST00000569390	ID1	P41134	155 aa		13.65	□□□□□ -0.22
NEIL1-222	ENST00000569390	OR2F1	Q13607	317 aa		13.65	□□□□□ -0.22
NEIL1-222	ENST00000569390	C11orf45	Q8TAV5	145 aa		13.65	□□□□□ -0.22
NEIL1-222	ENST00000569390	C1QTNF4	Q9BXJ3	329 aa		13.65	□□□□□ -0.22
NEIL1-222	ENST00000569390	AGRN	O00468	2067 aa		13.65	□□□□□ -0.22
NEIL1-222	ENST00000569390	GIG44	P09565	113 aa	Predicted RBP	13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	MIF	P14174	115 aa		13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	ANXA7	P20073	488 aa	Known RBP	13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	AKR1C1	Q04828	323 aa		13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	BPIFC	Q8NFQ6	507 aa		13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	OR4D5	Q8NGN0	318 aa		13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	LINC00476	Q8WZB0	136 aa		13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390	ALMS1	Q8TCU4	4167 aa		13.64	□□□□□ -0.23
NEIL1-222	ENST00000569390		H3BP45	60 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	C4BPB	P20851	252 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	PSMB3	P49720	205 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	POLR2G	P62487	172 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	ACOT7L	Q6ZUV0	252 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	OR8I2	Q8N0Y5	310 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	MITD1	Q8WV92	249 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	SMIM8	Q96KF7	97 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	PSENEN	Q9NZ42	101 aa		13.63	□□□□□ -0.23
NEIL1-222	ENST00000569390	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.62	□□□□□ -0.23
NEIL1-222	ENST00000569390		H3BMM0	161 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms