RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TAX1BP3O14907 124 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 TMEM14CQ9P0S9 112 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 CNTRLQ7Z7A1 2325 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 OOSP1A8MZH6 123 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 LEPROTO15243 131 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 PPP1R32Q7Z5V6 425 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 GLRXP35754 106 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 HCP5Q6MZN7 132 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 LY6G5BQ8NDX9 201 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 C20orf78Q9BR46 151 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 IGHV1-69DA0A0B4J2H0 117 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 LOXL3P58215 753 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 VWC2Q2TAL6 325 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 KLF14Q8TD94 323 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-216ENST00000569240 WBP1Q96G27 269 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 NRTNQ99748 197 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 ZNF747Q9BV97 191 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 SS18L2Q9UHA2 77 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 RFNGQ9Y644 331 aa5.87□□□□□ -1.47
CNOT1-216ENST00000569240 C15orf62A8K5M9 175 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 IGLL5B9A064 214 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 CCL2P13500 99 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 HGFACQ04756 655 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 CCL17Q92583 94 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 GFRA3O60609 400 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 SYNJ2BPP57105 145 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 RBMY1FQ15415 496 aaKnown RBP5.86□□□□□ -1.47
CNOT1-216ENST00000569240 LINC00477Q96M19 166 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 SCRT1Q9BWW7 348 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 COL11A1P12107 1806 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-216ENST00000569240 ANKRD36A6QL64 1941 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 KNCNA6PVL3 124 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 C9orf139Q6ZV77 190 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 IL17RELQ6ZVW7 336 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 ZNF329Q86UD4 541 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 SCRT2Q9NQ03 307 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 IGHV3-64DA0A0J9YX35 117 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 FOXI1Q12951 378 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 TMEM158Q8WZ71 300 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 SPATA25Q9BR10 227 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 ATP5EP56381 51 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-216ENST00000569240 PIFOQ8TCI5 191 aa5.86□□□□□ -1.47
CNOT1-216ENST00000569240 IGKV1D-8A0A087WSZ0 117 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 CD55P08174 381 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 LYZL1Q6UWQ5 148 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 RPUSD1Q9UJJ7 312 aaKnown RBP5.85□□□□□ -1.47
CNOT1-216ENST00000569240 CCL11P51671 97 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 BMPERQ8N8U9 685 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 SIT1Q9Y3P8 196 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 C4orf51C9J302 202 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 UQCRQO14949 82 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 THBDP07204 575 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 CDK5RAP2Q96SN8 1893 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 SAA1P0DJI8 122 aaPredicted RBP5.85□□□□□ -1.47
CNOT1-216ENST00000569240 COL18A1P39060 1754 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 PF4V1P10720 104 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 NPC2P61916 151 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 HIST1H4AP62805 103 aaKnown RBP5.85□□□□□ -1.47
CNOT1-216ENST00000569240 C5orf67F2Z3F1 127 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 M0R381 172 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 PLAURQ03405 335 aa5.85□□□□□ -1.47
CNOT1-216ENST00000569240 CELA3AP09093 270 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 DPM3Q9P2X0 92 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 PRRC2BQ5JSZ5 2229 aaKnown RBP5.84□□□□□ -1.47
CNOT1-216ENST00000569240 IGKV3D-15A0A087WSY6 115 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 C16orf97H3BN30 126 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 Q6ZT83 130 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 TIMM21Q9BVV7 248 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 DEPPQ9NTK1 212 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 ITGB4P16144 1822 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 A0A0B4J2C4 111 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 CD28P10747 220 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 LTBRP36941 435 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 ZNF138P52744 262 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 CMC4P56277 68 aaPredicted RBP5.84□□□□□ -1.47
CNOT1-216ENST00000569240 C1orf43Q9BWL3 253 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 IGLV3-12A0A075B6K2 115 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 A0A087WX48 190 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 IGHV1-45A0A0A0MS14 117 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 CFC1BP0CG36 223 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 CFC1P0CG37 223 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 ZIC4Q8N9L1 334 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 ITLN1Q8WWA0 313 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 IGFBPL1Q8WX77 278 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 LYZL4Q96KX0 146 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 CCL13Q99616 98 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 NAA38Q9BRA0 125 aaKnown RBP5.84□□□□□ -1.47
CNOT1-216ENST00000569240 PRDM6Q9NQX0 595 aa5.84□□□□□ -1.47
CNOT1-216ENST00000569240 TRAV13-2A0A0B4J235 113 aa5.84□□□□□ -1.48
CNOT1-216ENST00000569240 MYOD1P15172 320 aa5.84□□□□□ -1.48
CNOT1-216ENST00000569240 C5orf64Q2M2E5 130 aa5.84□□□□□ -1.48
CNOT1-216ENST00000569240 MBNL3Q9NUK0 354 aaKnown RBP5.84□□□□□ -1.48
CNOT1-216ENST00000569240 PSME4Q14997 1843 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 ZNF236Q9UL36 1845 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 NDUFB8O95169 186 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 PAX9P55771 341 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 LRRC75A-AS1Q8N1F1 130 aa5.83□□□□□ -1.48
CNOT1-216ENST00000569240 Q6Q795 121 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms