RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 GATAD1Q8WUU5 269 aa5.71□□□□□ -1.5
CDH3-209ENST00000569080 LINC00476Q8WZB0 136 aa5.71□□□□□ -1.5
CDH3-209ENST00000569080 RNF125Q96EQ8 232 aa5.71□□□□□ -1.5
CDH3-209ENST00000569080 RABAC1Q9UI14 185 aa5.71□□□□□ -1.5
CDH3-209ENST00000569080 TMED3Q9Y3Q3 217 aa5.71□□□□□ -1.5
CDH3-209ENST00000569080 DNAH10Q8IVF4 4471 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 PIGBOS1A0A0B4J2F0 54 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 C9orf170A2RU37 121 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 HELTA6NFD8 242 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 KNCNA6PVL3 124 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 JTBO76095 146 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 IFNA4P05014 189 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 RD3LP0DJH9 198 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 GPX4P36969 197 aaPredicted RBP5.7□□□□□ -1.5
CDH3-209ENST00000569080 UBE2MP61081 183 aaKnown RBP5.7□□□□□ -1.5
CDH3-209ENST00000569080 ZNF90Q03938 601 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 PMS2P11Q13670 270 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 GGNBP1Q5YKI7 109 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 OR8G2PQ6IF36 304 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 THAP8Q8NA92 274 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 Q8NAQ8 132 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 OR51G1Q8NGK1 321 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 FLVCR2Q9UPI3 526 aa5.7□□□□□ -1.5
CDH3-209ENST00000569080 CXorf65A6NEN9 183 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 NUPR2A6NF83 97 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 NAP1L6A6NFF2 107 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 SOCS3O14543 225 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 SYNGR2O43760 224 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 ADAP1O75689 374 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 HOXB5P09067 269 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 IL7P13232 177 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 EIF2B2P49770 351 aaKnown RBP5.69□□□□□ -1.5
CDH3-209ENST00000569080 DHRS2Q13268 280 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 CEMP1Q6PRD7 247 aaPredicted RBP5.69□□□□□ -1.5
CDH3-209ENST00000569080 SIGLEC15Q6ZMC9 328 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 CSNK1G2-AS1Q8NCQ2 148 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 OR4D5Q8NGN0 318 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 OR11H2Q8NH07 326 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 NARS2Q96I59 477 aaKnown RBP5.69□□□□□ -1.5
CDH3-209ENST00000569080 SLC35E1Q96K37 410 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 TRGV9Q99603 122 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 RARRES2Q99969 163 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 MAGT1Q9H0U3 335 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 SEPSECSQ9HD40 501 aaKnown RBP5.69□□□□□ -1.5
CDH3-209ENST00000569080 NRN1Q9NPD7 142 aa5.69□□□□□ -1.5
CDH3-209ENST00000569080 HECTD4Q9Y4D8 3996 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 ZFP92A6NM28 416 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 PMS2P5A8MQ11 134 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 ZNF705EA8MWA4 302 aaPredicted RBP5.68□□□□□ -1.5
CDH3-209ENST00000569080 H3BP45 60 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 SPP1P10451 314 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 ANXA7P20073 488 aaKnown RBP5.68□□□□□ -1.5
CDH3-209ENST00000569080 ID3Q02535 119 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 PSMG4Q5JS54 123 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 ACTL10Q5JWF8 245 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 TRIQKQ629K1 86 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 MORN3Q6PF18 240 aaPredicted RBP5.68□□□□□ -1.5
CDH3-209ENST00000569080 ACOT7LQ6ZUV0 252 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 STHQ8IWL8 128 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 TMEM217Q8N7C4 229 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 C17orf77Q96MU5 243 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 CIB3Q96Q77 187 aaPredicted RBP5.68□□□□□ -1.5
CDH3-209ENST00000569080 RAB40CQ96S21 281 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 WDR12Q9GZL7 423 aaKnown RBP5.68□□□□□ -1.5
CDH3-209ENST00000569080 X6R8D5 127 aa5.68□□□□□ -1.5
CDH3-209ENST00000569080 H3BMM0 161 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 WRBO00258 174 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 DEFB4AO15263 64 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 PLA2G10O15496 165 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 MED6O75586 246 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 OR4E1P0C645 316 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 RBMY1A1P0DJD3 496 aaKnown RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 RBMY1CP0DJD4 496 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 NUP62P37198 522 aaPredicted RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 AP2S1P53680 142 aaPredicted RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 PAX9P55771 341 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 DEFB1P60022 68 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 NANOS2P60321 138 aaKnown RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 LYZP61626 148 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 POLR2GP62487 172 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDH3-209ENST00000569080 RAB11AP62491 216 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 OR2F1Q13607 317 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 RBMY1FQ15415 496 aaKnown RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 TMEM41BQ5BJD5 291 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 C1orf194Q5T5A4 169 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 GDF5OSQ5U4N7 250 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 TMEM182Q6ZP80 229 aaPredicted RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 PHLDA1Q8WV24 401 aaPredicted RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 C7orf50Q9BRJ6 194 aaKnown RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 PBDC1Q9BVG4 233 aa5.67□□□□□ -1.5
CDH3-209ENST00000569080 RCL1Q9Y2P8 373 aaKnown RBP5.67□□□□□ -1.5
CDH3-209ENST00000569080 IGHV4-28A0A0C4DH34 117 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 LINC00854A0A1B0GVQ3 168 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 CCNKO75909 580 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 HLA-DRB4P13762 266 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 NKX2-1P43699 371 aaPredicted RBP5.66□□□□□ -1.5
CDH3-209ENST00000569080 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
CDH3-209ENST00000569080 SPANXN5Q5MJ07 72 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 GSG1LQ6UXU4 331 aa5.66□□□□□ -1.5
CDH3-209ENST00000569080 COQ8AQ8NI60 647 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms