RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 NRN1Q9NPD7 142 aa7.69□□□□□ -1.18
TMX3-210ENST00000569053 DKK2Q9UBU2 259 aa7.69□□□□□ -1.18
TMX3-210ENST00000569053 HLA-DRB4X5D2U9 266 aa7.69□□□□□ -1.18
TMX3-210ENST00000569053 IGKV1D-37A0A075B6S9 117 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 IGHV3OR16-12A0A075B7B8 117 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 TRAV30A0A087WSZ9 112 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 CDS2O95674 445 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 OR5AC1P0C628 307 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 PSG1P11464 419 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 SPCS3P61009 180 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 TRIM16LQ309B1 348 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 FAM222AQ5U5X8 452 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 SIGLEC15Q6ZMC9 328 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 OR51G1Q8NGK1 321 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 Q8WTZ3 238 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 ZNF486Q96H40 463 aaPredicted RBP7.68□□□□□ -1.18
TMX3-210ENST00000569053 NAA50Q9GZZ1 169 aaKnown RBP7.68□□□□□ -1.18
TMX3-210ENST00000569053 MTFP1Q9UDX5 166 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 CACNG5Q9UF02 275 aa7.68□□□□□ -1.18
TMX3-210ENST00000569053 TOMM40O96008 361 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 IFNA10P01566 189 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 NKX2-1P43699 371 aaPredicted RBP7.67□□□□□ -1.18
TMX3-210ENST00000569053 ANKRD39Q53RE8 183 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 RNASE10Q5GAN6 216 aaKnown RBP7.67□□□□□ -1.18
TMX3-210ENST00000569053 OR52E5Q8NH55 327 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 TERB2Q8NHR7 220 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 RNF141Q8WVD5 230 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 C20orf173Q96LM9 149 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 PDCD10Q9BUL8 212 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 FUNDC2Q9BWH2 189 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 TMEM222Q9H0R3 208 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 SAV1Q9H4B6 383 aaPredicted RBP7.67□□□□□ -1.18
TMX3-210ENST00000569053 Q9H521 79 aa7.67□□□□□ -1.18
TMX3-210ENST00000569053 TEX13DA0A0J9YY54 714 aaPredicted RBP7.66□□□□□ -1.18
TMX3-210ENST00000569053 HTN3P15516 51 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 NPY1RP25929 384 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 HTR2BP41595 481 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 AP2S1P53680 142 aaPredicted RBP7.66□□□□□ -1.18
TMX3-210ENST00000569053 ZNF90Q03938 601 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 ZNF79Q15937 498 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 TMEM88Q6PEY1 159 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 ARRDC1Q8N5I2 433 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 SLC24A4Q8NFF2 622 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 RRNAD1Q96FB5 475 aaKnown RBP7.66□□□□□ -1.18
TMX3-210ENST00000569053 ACY3Q96HD9 319 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 NIPSNAP3BQ9BS92 247 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 C1QTNF4Q9BXJ3 329 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 MIXL1Q9H2W2 232 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 SEPSECSQ9HD40 501 aaKnown RBP7.66□□□□□ -1.18
TMX3-210ENST00000569053 ENY2Q9NPA8 101 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 HEYLQ9NQ87 328 aaPredicted RBP7.66□□□□□ -1.18
TMX3-210ENST00000569053 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.66□□□□□ -1.18
TMX3-210ENST00000569053 COPZ2Q9P299 210 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 HERC1Q15751 4861 aa7.66□□□□□ -1.18
TMX3-210ENST00000569053 SMIM31A0A1B0GVY4 71 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 RPS10-NUDT3A0A1W2PQS6 291 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 RD3LP0DJH9 198 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 SNRPD3P62318 126 aaKnown RBP7.65□□□□□ -1.18
TMX3-210ENST00000569053 SCGB2B2Q4G0G5 96 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 NMSQ5H8A3 153 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 TMEM229BQ8NBD8 167 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 RNASEH2CQ8TDP1 164 aaKnown RBP7.65□□□□□ -1.18
TMX3-210ENST00000569053 NARS2Q96I59 477 aaKnown RBP7.65□□□□□ -1.18
TMX3-210ENST00000569053 LINC00052Q96N35 136 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 YTHDF2Q9Y5A9 579 aaKnown RBP7.65□□□□□ -1.18
TMX3-210ENST00000569053 RFNGQ9Y644 331 aa7.65□□□□□ -1.18
TMX3-210ENST00000569053 FAM25AB3EWG3 89 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 FAM25CB3EWG5 89 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 FAM25GB3EWG6 89 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 IFNA21P01568 189 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 SLC25A4P12235 298 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 NUTF2P61970 127 aaKnown RBP7.64□□□□□ -1.19
TMX3-210ENST00000569053 C1orf134Q5TEV5 83 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 FAM78BQ5VT40 261 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 TMEM268Q5VZI3 342 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 AMTNQ6UX39 209 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 FOXI2Q6ZQN5 318 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 CENPSQ8N2Z9 138 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 OR4B1Q8NGF8 309 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 RNASE11Q8TAA1 199 aaKnown RBP7.64□□□□□ -1.19
TMX3-210ENST00000569053 ZFAND1Q8TCF1 268 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 RBPMSQ93062 196 aaKnown RBP7.64□□□□□ -1.19
TMX3-210ENST00000569053 RNF125Q96EQ8 232 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 CLUHP3Q96NS8 147 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 NAA60Q9H7X0 242 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 EXTL2Q9UBQ6 330 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 GPR132Q9UNW8 380 aa7.64□□□□□ -1.19
TMX3-210ENST00000569053 IGKV1OR2-108A0A075B7D4 117 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 LOC102723971A0A1B0GUV8 181 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 SMIM9A6NGZ8 99 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 CRYM-AS1A6NIL9 109 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 CEBPZOSA8MTT3 80 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 A8MTW9 85 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
TMX3-210ENST00000569053 ATG12O94817 140 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 RAB3DO95716 219 aa7.63□□□□□ -1.19
TMX3-210ENST00000569053 EIF2B2P49770 351 aaKnown RBP7.63□□□□□ -1.19
TMX3-210ENST00000569053 RORCP51449 518 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms