RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	IGHV3OR16-12	A0A075B7B8	117 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	HBE1	P02100	147 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	CD3D	P04234	171 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ALDH3B2	P48448	385 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	GPR141	Q7Z602	305 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	OR51G1	Q8NGK1	321 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	NPIPB3	Q92617	1050 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	KLK11	Q9UBX7	282 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	TMED3	Q9Y3Q3	217 aa		11.19	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ABCA13	Q86UQ4	5058 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	CEBPZOS	A8MTT3	80 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	PSG1	P11464	419 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ELK1	P19419	428 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	C1orf194	Q5T5A4	169 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ZNF709	Q8N972	641 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	OR13C8	Q8NGS7	320 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	COQ8A	Q8NI60	647 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	RNF125	Q96EQ8	232 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ACY3	Q96HD9	319 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	MTFP1	Q9UDX5	166 aa		11.18	□□□□□ -0.62
HERPUD1-215	ENST00000568676	PAX9	P55771	341 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	PSG9	Q00887	426 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ZNF79	Q15937	498 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	RRN3P1	Q2M238	152 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	GDF5OS	Q5U4N7	250 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	EBLN2	Q6P2I7	272 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	MZT2A	Q6P582	158 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	GLYATL2	Q8WU03	294 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	LINC00052	Q96N35	136 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	KRTAP4-5	Q9BYR2	181 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	CACNG5	Q9UF02	275 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	C14orf166	Q9Y224	244 aa	Known RBP	11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676		U3KQ87	197 aa		11.17	□□□□□ -0.62
HERPUD1-215	ENST00000568676	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	LOC102723971	A0A1B0GUV8	181 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	C16orf90	A8MZG2	172 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ISLR	O14498	428 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	HPGDS	O60760	199 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	IGKV3-20	P01619	116 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	FABP1	P07148	127 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	OR5AC1	P0C628	307 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	HTN3	P15516	51 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ATP5I	P56385	69 aa	Predicted RBP	11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	TAS2R19	P59542	299 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	DAD1	P61803	113 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	NCS1	P62166	190 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	SUPT4H1	P63272	117 aa	Known RBP	11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	SURF2	Q15527	256 aa	Predicted RBP	11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	NMS	Q5H8A3	153 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	TMEM88	Q6PEY1	159 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	GSG1L	Q6UXU4	331 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	TMEM229B	Q8NBD8	167 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	OR4B1	Q8NGF8	309 aa		11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	C7orf50	Q9BRJ6	194 aa	Known RBP	11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.16	□□□□□ -0.62
HERPUD1-215	ENST00000568676	FAM25A	B3EWG3	89 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	FAM25C	B3EWG5	89 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	FAM25G	B3EWG6	89 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	NXPH3	O95157	252 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	GABARAP	O95166	117 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	MEOX2	P50222	304 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	RORC	P51449	518 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	FXYD7	P58549	80 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	VBP1	P61758	197 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	KLF9	Q13886	244 aa	Predicted RBP	11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	SCGB2B2	Q4G0G5	96 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	GPR107	Q5VW38	600 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	OR52I2	Q8NH67	350 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	MARCH1	Q8TCQ1	289 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	TMEM170A	Q8WVE7	144 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	AP3S1	Q92572	193 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	ATG101	Q9BSB4	218 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	NAA60	Q9H7X0	242 aa		11.15	□□□□□ -0.62
HERPUD1-215	ENST00000568676	SOCS3	O14543	225 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	RAB3D	O95716	219 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SSBP1	Q04837	148 aa	Known RBP	11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SELENOH	Q8IZQ5	122 aa	Known RBP	11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	C1orf158	Q8N1D5	194 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	IL22RA2	Q969J5	263 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	GPR146	Q96CH1	333 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	PBDC1	Q9BVG4	233 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	WDR12	Q9GZL7	423 aa	Known RBP	11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	MAGT1	Q9H0U3	335 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SLC35B3	Q9H1N7	401 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	RPRM	Q9NS64	109 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	TMEM56-RWDD3	S4R434	201 aa		11.14	□□□□□ -0.63
HERPUD1-215	ENST00000568676	ZFP92	A6NM28	416 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	LYRM9	A8MSI8	78 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SULT1A3	P0DMM9	295 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SULT1A4	P0DMN0	295 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	GPX4	P36969	197 aa	Predicted RBP	11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	B2M	P61769	119 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	MEF2D	Q14814	521 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	FAM78B	Q5VT40	261 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	TMEM268	Q5VZI3	342 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	STEAP1B	Q6NZ63	245 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	MAPKAPK5-AS1	Q8N8E1	139 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	OR4D10	Q8NGI6	311 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676	LHFPL5	Q8TAF8	219 aa		11.13	□□□□□ -0.63
HERPUD1-215	ENST00000568676		A0A0J9YX75	114 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms