RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 V9GYH0 126 aa8.9□□□□□ -0.98
GTF3C1-208ENST00000567843 IGHV4-28A0A0C4DH34 117 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 ZFP92A6NM28 416 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 BUB3O43684 328 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 RBMY1A1P0DJD3 496 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 RBMY1CP0DJD4 496 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 ATF4P18848 351 aaPredicted RBP8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 FAUP35544 74 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 EIF2B2P49770 351 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 GAMTQ14353 236 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 RBMY1FQ15415 496 aaKnown RBP8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 ZNF79Q15937 498 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 RNF125Q96EQ8 232 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 MAGT1Q9H0U3 335 aa8.89□□□□□ -0.99
GTF3C1-208ENST00000567843 KMT2AQ03164 3969 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 IGKV1D-37A0A075B6S9 117 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 FAM90A26D6RGX4 464 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 IGKV3-20P01619 116 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 HOXB5P09067 269 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 LYZP61626 148 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 SIGLEC15Q6ZMC9 328 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 Q8NAQ8 132 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 SLC35E1Q96K37 410 aa8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 C11orf68Q9H3H3 251 aaKnown RBP8.88□□□□□ -0.99
GTF3C1-208ENST00000567843 LINC00854A0A1B0GVQ3 168 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 S100A5P33763 92 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 AP2S1P53680 142 aaPredicted RBP8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 FXYD7P58549 80 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 AP3S2P59780 193 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 SRPXP78539 464 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 PPP1R1AQ13522 171 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 TMEM128Q5BJH2 165 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 MORN3Q6PF18 240 aaPredicted RBP8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 MFFQ9GZY8 342 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 NRN1Q9NPD7 142 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 XCL2Q9UBD3 114 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 X6R8D5 127 aa8.87□□□□□ -0.99
GTF3C1-208ENST00000567843 WRBO00258 174 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 PITX3O75364 302 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 SFT2D2O95562 160 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 SPP1P10451 314 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 HLA-DMBP28068 263 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 ZNF767PQ75MW2 155 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 CCDC190Q86UF4 302 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 PPP1R14BQ96C90 147 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 LINC00052Q96N35 136 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 WDR12Q9GZL7 423 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 CACFD1Q9UGQ2 172 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 TBC1D24Q9ULP9 559 aa8.86□□□□□ -0.99
GTF3C1-208ENST00000567843 ELOA3CA0A087WX78 387 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 IGLL5B9A064 214 aa8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 H3BP45 60 aa8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 GATA2P23769 480 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 GPX4P36969 197 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 SNRPD3P62318 126 aaKnown RBP8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 RAB11AP62491 216 aa8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 GDF5OSQ5U4N7 250 aa8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 GGNBP1Q5YKI7 109 aa8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 CENPSQ8N2Z9 138 aa8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 CSNK1G2-AS1Q8NCQ2 148 aa8.85□□□□□ -0.99
GTF3C1-208ENST00000567843 FRAS1Q86XX4 4008 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 IGKV1OR2-108A0A075B7D4 117 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 ZNF705EA8MWA4 302 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 H3BMM0 161 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 ADAP1O75689 374 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 MIFP14174 115 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 PRR20EP86478 221 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 PRR20CP86479 221 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 PRR20DP86480 221 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 PRR20BP86481 221 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 PRR20AP86496 221 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 BAK1Q16611 211 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 SPANXN5Q5MJ07 72 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 Q6ZTC4 211 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 C2CD4CQ8TF44 421 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 SLC25A21Q9BQT8 299 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 SRRQ9GZT4 340 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 RBM38Q9H0Z9 239 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 CELA1Q9UNI1 258 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 FLVCR2Q9UPI3 526 aa8.84□□□□□ -0.99
GTF3C1-208ENST00000567843 IGHV3OR16-12A0A075B7B8 117 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 DUXBA0A1W2PPF3 345 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 SNRPGP15A8MWD9 76 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 F6UB75 175 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 SYNGR2O43760 224 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 INPP1P49441 399 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 ATP5IP56385 69 aaPredicted RBP8.83□□□□□ -1
GTF3C1-208ENST00000567843 TMEM41BQ5BJD5 291 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 OR8G2PQ6IF36 304 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 TMEM182Q6ZP80 229 aaPredicted RBP8.83□□□□□ -1
GTF3C1-208ENST00000567843 LRTM2Q8N967 370 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 SLC25A22Q9H936 323 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 TMED3Q9Y3Q3 217 aa8.83□□□□□ -1
GTF3C1-208ENST00000567843 C9orf170A2RU37 121 aa8.82□□□□□ -1
GTF3C1-208ENST00000567843 MED6O75586 246 aa8.82□□□□□ -1
GTF3C1-208ENST00000567843 FABP1P07148 127 aa8.82□□□□□ -1
GTF3C1-208ENST00000567843 EMP1P54849 157 aa8.82□□□□□ -1
GTF3C1-208ENST00000567843 POLR2GP62487 172 aaKnown RBP eCLIP8.82□□□□□ -1
GTF3C1-208ENST00000567843 SPANXN2Q5MJ10 180 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms