RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 CCDC28AQ8IWP9 274 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 COMMD1Q8N668 190 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 C11orf44Q8N8P7 122 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 THAP8Q8NA92 274 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 RNASEH2CQ8TDP1 164 aaKnown RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 RXFP4Q8TDU9 374 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 ABHD5Q8WTS1 349 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 NPIPB3Q92617 1050 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 ARPC1AQ92747 370 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 SLC35E1Q96K37 410 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 SLC25A33Q9BSK2 321 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 EIF5A2Q9GZV4 153 aaKnown RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 SERTAD4Q9NUC0 356 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 SLC39A9Q9NUM3 307 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 BEX4Q9NWD9 120 aaPredicted RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 GNG13Q9P2W3 67 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 C11orf21Q9P2W6 132 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 CARHSP1Q9Y2V2 147 aaKnown RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 S4R3C0 116 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 TEX15Q9BXT5 2789 aa4.49□□□□□ -1.69
SF3B3-210ENST00000567654 HELZ2Q9BYK8 2649 aaKnown RBP4.49□□□□□ -1.69
SF3B3-210ENST00000567654 GCN1Q92616 2671 aaKnown RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 IGLV11-55A0A075B6I3 123 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 BTBD17A6NE02 478 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 FAM74A7A6NL05 159 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 B4DSR2 109 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 K7EIM0 57 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 SOX15O60248 233 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 CNIH1O95406 144 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 HBE1P02100 147 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 STAG3L2P0CL84 134 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 STAG3L3P0CL85 134 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 RPL29P47914 159 aaKnown RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 ATP5IP56385 69 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 LOXL1Q08397 574 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 LY6EQ16553 131 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 ACOT6Q3I5F7 207 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 FAM74A3Q4VXF1 159 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 FAM90A2PQ658T7 463 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 PATE2Q6UY27 113 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 CYP2G1PQ6ZSU1 146 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 LRRC75A-AS1Q8N1F1 130 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 CIARTQ8N365 385 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 C5orf56Q8N8D9 126 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 ZNF709Q8N972 641 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 LFNGQ8NES3 379 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 OR1P1Q8NH06 330 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 TMEM37Q8WXS4 190 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 ZNF414Q96IQ9 312 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 PRR25Q96S07 402 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
SF3B3-210ENST00000567654 ACTR3CQ9C0K3 210 aaPredicted RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 SEPSECSQ9HD40 501 aaKnown RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 FASNP49327 2511 aaKnown RBP4.48□□□□□ -1.69
SF3B3-210ENST00000567654 TRAV5A0A0B4J249 113 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 TCRBV4S1A1TA0A5B7 111 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 A6NDX4 124 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 G3V318 75 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 H3BUX3 64 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 DNASE2O00115 360 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-210ENST00000567654 ATP6V0E1O15342 81 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 CYB5BO43169 146 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 NDUFB8O95169 186 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 TGFAP01135 160 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 IGHV3-23P01764 117 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 HLA-DRB1P01911 266 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 MBP02144 154 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 FAM106CPP0CH98 169 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 ARL14EPLP0DKL9 152 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 BCL2P10415 239 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 NPPCP23582 126 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 BRS3P32247 399 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 ATP5G3P48201 142 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 SUB1P53999 127 aaKnown RBP eCLIP4.47□□□□□ -1.691e-9■■■■■ 39.5
SF3B3-210ENST00000567654 CD81P60033 236 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 KIAA0141Q14154 515 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-210ENST00000567654 PEA15Q15121 130 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 TMEM249Q2WGJ8 235 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 TIGITQ495A1 244 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 ZNF562Q6V9R5 426 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 Q6ZWC4 215 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 IQCF2Q8IXL9 164 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 CYB561D1Q8N8Q1 229 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 WFDC11Q8NEX6 87 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 OR5T1Q8NG75 326 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 CACNG8Q8WXS5 425 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 C22orf15Q8WYQ4 148 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 FAM167A-AS1Q96KT0 104 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 RBM14Q96PK6 669 aaKnown RBP4.47□□□□□ -1.69
SF3B3-210ENST00000567654 SSX3Q99909 188 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 SRSF8Q9BRL6 282 aaKnown RBP4.47□□□□□ -1.69
SF3B3-210ENST00000567654 C20orf24Q9BUV8 137 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 NKX6-2Q9C056 277 aaPredicted RBP4.47□□□□□ -1.69
SF3B3-210ENST00000567654 DOK5Q9P104 306 aa4.47□□□□□ -1.69
SF3B3-210ENST00000567654 ITPR2Q14571 2701 aa4.46□□□□□ -1.69
SF3B3-210ENST00000567654 NPIPB5A8MRT5 1133 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 NUPL2O15504 423 aaKnown RBP4.46□□□□□ -1.7
SF3B3-210ENST00000567654 PAGE4O60829 102 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 OR2J3O76001 311 aa4.46□□□□□ -1.7
SF3B3-210ENST00000567654 HSPB1P04792 205 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms