RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ANGPT1Q15389 498 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TSNQ15631 228 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OCIAD2Q56VL3 154 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 GLYATL3Q5SZD4 288 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 C1orf134Q5TEV5 83 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 SDHAF4Q5VUM1 108 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 LPCAT3Q6P1A2 487 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 RPL22L1Q6P5R6 122 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 DPPA3Q6W0C5 159 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 Q6ZQY7 126 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 LRRC25Q8N386 305 aaPredicted RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 LINC00471Q8N535 108 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 C12orf45Q8N5I9 185 aaPredicted RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 SLC30A7Q8NEW0 376 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OR5D14Q8NGL3 314 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OR13C4Q8NGS5 318 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OR10AC1Q8NH08 325 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 STAG3L4Q8TBR4 150 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 ZNF75CPQ92670 426 aaPredicted RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 SLC35B4Q969S0 331 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TOMM6Q96B49 74 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 MUCL1Q96DR8 90 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 MALSU1Q96EH3 234 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H2BLQ99880 126 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 NIPSNAP1Q9BPW8 284 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 C7orf50Q9BRJ6 194 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 KIFC1Q9BW19 673 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 PARD6GQ9BYG4 376 aaPredicted RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 COMMD5Q9GZQ3 224 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OR52A5Q9H2C5 316 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TMEM133Q9H2Q1 129 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OR51I2Q9H344 312 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 BCL2L10Q9HD36 194 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OSTCQ9NRP0 149 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 C14orf105Q9NVL8 296 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 RSL24D1Q9UHA3 163 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 C3orf18Q9UK00 162 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 JPT1Q9UK76 154 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OR52A1Q9UKL2 312 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 SLC35A3Q9Y2D2 325 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 UTP11Q9Y3A2 253 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 ASB4Q9Y574 426 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 RREB1Q92766 1687 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 RTL1A6NKG5 1358 aa-0.22□□□□□ -2.45
CDH1-211ENST00000567320 ABCC11Q96J66 1382 aa-0.22□□□□□ -2.45
CDH1-211ENST00000567320 WNK2Q9Y3S1 2297 aa-0.22□□□□□ -2.45
CDH1-211ENST00000567320 TANC1Q9C0D5 1861 aa-0.22□□□□□ -2.45
CDH1-211ENST00000567320 PTPRFP10586 1907 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TPRP12270 2363 aaKnown RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 LRP1BQ9NZR2 4599 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 NISCHQ9Y2I1 1504 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SCN10AQ9Y5Y9 1956 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SSC5DA1L4H1 1573 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 UNC13BO14795 1591 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SCN3AQ9NY46 2000 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 PIEZO1Q92508 2521 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 A0A0D9SG52 128 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 LOC107984156A0A0G2JMH3 177 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TMEM213A2RRL7 107 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 OR4C46A6NHA9 309 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 E7EUB6 86 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 F8VZ95 297 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 F8W1H4 67 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 H0Y980 276 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 H3BRM9 83 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 K7ERJ3 54 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 M0QZ92 97 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 OR2B3O76000 313 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ERC2-IT1O76042 136 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 PROSCO94903 275 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 CNIH1O95406 144 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 DHFRP00374 187 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 APOA1P02647 267 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SERPINE1P05121 402 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ISG15P05161 165 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SMIM17P0DL12 118 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 C8orf88P0DMB2 117 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SMIM10L2AP0DMW4 78 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SMIM10L2BP0DMW5 78 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 CXCL8P10145 99 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 COX7CP15954 63 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TCL1AP56279 114 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 DSCR4P56555 118 aaPredicted RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SKP1P63208 163 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 CAV1Q03135 178 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 EIF3IQ13347 325 aaKnown RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 OR2F1Q13607 317 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 FXYD3Q14802 87 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ZNF56Q15929 161 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SPATA45Q537H7 98 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 C8orf74Q6P047 294 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 CD200R1LQ6Q8B3 271 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 LRRN1Q6UXK5 716 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 C4orf22Q6V702 233 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SLC51BQ86UW2 128 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ANGPTL5Q86XS5 388 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ARL17AQ8IVW1 177 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 PDZD9Q8IXQ8 264 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms