RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 AP2S1P53680 142 aaPredicted RBP10.4□□□□□ -0.74
COMMD4-216ENST00000567023 TMEM41BQ5BJD5 291 aa10.4□□□□□ -0.74
COMMD4-216ENST00000567023 C16orf54Q6UWD8 224 aa10.4□□□□□ -0.74
COMMD4-216ENST00000567023 TRPT1Q86TN4 253 aaKnown RBP10.4□□□□□ -0.74
COMMD4-216ENST00000567023 STXBP6Q8NFX7 210 aa10.4□□□□□ -0.74
COMMD4-216ENST00000567023 MFFQ9GZY8 342 aa10.4□□□□□ -0.74
COMMD4-216ENST00000567023 HSPB7Q9UBY9 170 aa10.4□□□□□ -0.74
COMMD4-216ENST00000567023 HELTA6NFD8 242 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 LYRM1O43325 122 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 NXPH3O95157 252 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 HNRNPCP07910 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
COMMD4-216ENST00000567023 GIG44P09565 113 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-216ENST00000567023 SPP1P10451 314 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 ATP5IP56385 69 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-216ENST00000567023 SMCO1Q147U7 214 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 MORN3Q6PF18 240 aaPredicted RBP10.39□□□□□ -0.75
COMMD4-216ENST00000567023 C11orf45Q8TAV5 145 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 GLMPQ8WWB7 406 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 NPIPB3Q92617 1050 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 FLVCR2Q9UPI3 526 aa10.39□□□□□ -0.75
COMMD4-216ENST00000567023 BUB3O43684 328 aa10.38□□□□□ -0.75
COMMD4-216ENST00000567023 PITX3O75364 302 aa10.38□□□□□ -0.75
COMMD4-216ENST00000567023 TOMM40O96008 361 aa10.38□□□□□ -0.75
COMMD4-216ENST00000567023 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
COMMD4-216ENST00000567023 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
COMMD4-216ENST00000567023 USF2Q15853 346 aaPredicted RBP10.38□□□□□ -0.75
COMMD4-216ENST00000567023 SEPSECSQ9HD40 501 aaKnown RBP10.38□□□□□ -0.75
COMMD4-216ENST00000567023 TMED3Q9Y3Q3 217 aa10.38□□□□□ -0.75
COMMD4-216ENST00000567023 AGRNO00468 2067 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 C9orf170A2RU37 121 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 IFNA10P01566 189 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 IL4P05112 153 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 SLC25A6P12236 298 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 DHRS2Q13268 280 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 ZNF846Q147U1 533 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 LGALS9CQ6DKI2 356 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 Q8NAQ8 132 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 DTD1Q8TEA8 209 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 WDR12Q9GZL7 423 aaKnown RBP10.37□□□□□ -0.75
COMMD4-216ENST00000567023 HRH4Q9H3N8 390 aa10.37□□□□□ -0.75
COMMD4-216ENST00000567023 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 ZNF705EA8MWA4 302 aaPredicted RBP10.36□□□□□ -0.75
COMMD4-216ENST00000567023 OR4E1P0C645 316 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 PSG1P11464 419 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 ANXA7P20073 488 aaKnown RBP10.36□□□□□ -0.75
COMMD4-216ENST00000567023 GPX4P36969 197 aaPredicted RBP10.36□□□□□ -0.75
COMMD4-216ENST00000567023 NANOS2P60321 138 aaKnown RBP10.36□□□□□ -0.75
COMMD4-216ENST00000567023 CSNK1G2-AS1Q8NCQ2 148 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 ACY3Q96HD9 319 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 RAB40CQ96S21 281 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 C20orf85Q9H1P6 137 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 RBKSQ9H477 322 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 TBC1D24Q9ULP9 559 aa10.36□□□□□ -0.75
COMMD4-216ENST00000567023 KNCNA6PVL3 124 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 UPK1BO75841 260 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 TCRBP04435 133 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 IFNA4P05014 189 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 MIFP14174 115 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 TCTAP57738 103 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 ASAH1Q13510 395 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 OR51G1Q8NGK1 321 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 NRN1Q9NPD7 142 aa10.35□□□□□ -0.75
COMMD4-216ENST00000567023 FAM90A26D6RGX4 464 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 DEFB4AO15263 64 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 C4BPBP20851 252 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 SNRPD3P62318 126 aaKnown RBP10.34□□□□□ -0.75
COMMD4-216ENST00000567023 IFITM3Q01628 133 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 GAMTQ14353 236 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 C4orf46Q504U0 113 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 ACTL10Q5JWF8 245 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 GGNBP1Q5YKI7 109 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 SIGLEC15Q6ZMC9 328 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 COQ8AQ8NI60 647 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 MITD1Q8WV92 249 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 RNF125Q96EQ8 232 aa10.34□□□□□ -0.75
COMMD4-216ENST00000567023 IGKV1D-37A0A075B6S9 117 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 HOXB5P09067 269 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 RBMY1A1P0DJD3 496 aaKnown RBP10.33□□□□□ -0.76
COMMD4-216ENST00000567023 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
COMMD4-216ENST00000567023 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
COMMD4-216ENST00000567023 PSMG4Q5JS54 123 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 OR8G2PQ6IF36 304 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 OR1S1Q8NH92 325 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 C2CD4CQ8TF44 421 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 FBXL17Q9UF56 701 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 X6R8D5 127 aa10.33□□□□□ -0.76
COMMD4-216ENST00000567023 IGHV4-28A0A0C4DH34 117 aa10.32□□□□□ -0.76
COMMD4-216ENST00000567023 C11orf94C9JXX5 98 aa10.32□□□□□ -0.76
COMMD4-216ENST00000567023 ADAP1O75689 374 aa10.32□□□□□ -0.76
COMMD4-216ENST00000567023 ZNF90Q03938 601 aa10.32□□□□□ -0.76
COMMD4-216ENST00000567023 MZT2BQ6NZ67 158 aa10.32□□□□□ -0.76
COMMD4-216ENST00000567023 NUDT15Q9NV35 164 aa10.32□□□□□ -0.76
COMMD4-216ENST00000567023 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
COMMD4-216ENST00000567023 FAM240BA0A1B0GVZ2 78 aa10.31□□□□□ -0.76
COMMD4-216ENST00000567023 ZFP92A6NM28 416 aa10.31□□□□□ -0.76
COMMD4-216ENST00000567023 H3BMM0 161 aa10.31□□□□□ -0.76
COMMD4-216ENST00000567023 NKX2-1P43699 371 aaPredicted RBP10.31□□□□□ -0.76
COMMD4-216ENST00000567023 NUTF2P61970 127 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms