RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 OR2J3O76001 311 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 PRH1P02810 166 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 REG1AP05451 166 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 FGF7P21781 194 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 NDUFA5Q16718 116 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 RPEL1Q2QD12 228 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 DEFB121Q5J5C9 76 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 BTNL8Q6UX41 500 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 TMEM116Q8NCL8 245 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 MISP3Q96FF7 219 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 NPCDR1Q9BY65 106 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 FBXL7Q9UJT9 491 aa10.3□□□□□ -0.76
CLK3-218ENST00000566926 IGLV11-55A0A075B6I3 123 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 WI2-2373I1.2A0A1W2PRP0 233 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 FABP1P07148 127 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 SULT1A2P50226 295 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 DEFA5Q01523 94 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 GAMTQ14353 236 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 C15orf32Q32M92 178 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 CLLU1Q5K131 121 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 EEF1AKMT3Q96AZ1 226 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 SAT2Q96F10 170 aaPredicted RBP10.29□□□□□ -0.76
CLK3-218ENST00000566926 CXorf58Q96LI9 332 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 ATP6V0BQ99437 205 aa10.29□□□□□ -0.76
CLK3-218ENST00000566926 GAR1Q9NY12 217 aaKnown RBP10.29□□□□□ -0.76
CLK3-218ENST00000566926 PRKDCP78527 4128 aaKnown RBP10.29□□□□□ -0.76
CLK3-218ENST00000566926 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.28□□□□□ -0.76
CLK3-218ENST00000566926 MT-CO2P00403 227 aa10.28□□□□□ -0.76
CLK3-218ENST00000566926 CAMLGP49069 296 aa10.28□□□□□ -0.76
CLK3-218ENST00000566926 SELENOTP62341 195 aa10.28□□□□□ -0.76
CLK3-218ENST00000566926 KLF5Q13887 457 aaPredicted RBP10.28□□□□□ -0.76
CLK3-218ENST00000566926 AKR1C8PQ5T2L2 129 aa10.28□□□□□ -0.76
CLK3-218ENST00000566926 OR4X1Q8NH49 305 aa10.28□□□□□ -0.76
CLK3-218ENST00000566926 VN1R17PQ8TDU5 208 aa10.28□□□□□ -0.76
CLK3-218ENST00000566926 PEMTQ9UBM1 199 aa10.28□□□□□ -0.76
CLK3-218ENST00000566926 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
CLK3-218ENST00000566926 TRAV30A0A087WSZ9 112 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 I3L2K1 104 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 FCGR2BP31994 310 aaPredicted RBP10.27□□□□□ -0.77
CLK3-218ENST00000566926 RPL29P47914 159 aaKnown RBP10.27□□□□□ -0.77
CLK3-218ENST00000566926 NPBWR1P48145 328 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 MFAP2P55001 183 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 BLOC1S1P78537 153 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 THAP8Q8NA92 274 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 OR9G4Q8NGQ1 327 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 FANCD2OSQ96PS1 177 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 TXN2Q99757 166 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
CLK3-218ENST00000566926 FNDC4Q9H6D8 234 aaPredicted RBP10.27□□□□□ -0.77
CLK3-218ENST00000566926 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 AGPAT2O15120 278 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 GGCTO75223 188 aaKnown RBP10.26□□□□□ -0.77
CLK3-218ENST00000566926 NDUFB8O95169 186 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 RND2P52198 227 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 ACY3Q96HD9 319 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 TRGV9Q99603 122 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 MGST2Q99735 147 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 RSG1Q9BU20 258 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 DMRT1Q9Y5R6 373 aa10.26□□□□□ -0.77
CLK3-218ENST00000566926 ZFP92A6NM28 416 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 ZNF705EA8MWA4 302 aaPredicted RBP10.25□□□□□ -0.77
CLK3-218ENST00000566926 K7EIM0 57 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 BMPR1BO00238 502 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 TRBV12-3P01733 135 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 NMBP08949 121 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 MFAP4P55083 255 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 ACOT6Q3I5F7 207 aaPredicted RBP10.25□□□□□ -0.77
CLK3-218ENST00000566926 TMEM41BQ5BJD5 291 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 PXDC1Q5TGL8 231 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 GGTLC1Q9BX51 225 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 C21orf62Q9NYP8 219 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 SIGLEC8Q9NYZ4 499 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 PXMP4Q9Y6I8 212 aa10.25□□□□□ -0.77
CLK3-218ENST00000566926 CLN5O75503 358 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 M6PRP20645 277 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 ARL3P36405 182 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 RAB2AP61019 212 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 FAM74A1Q5RGS3 127 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 CLEC19AQ6UXS0 136 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 TMEM182Q6ZP80 229 aaPredicted RBP10.24□□□□□ -0.77
CLK3-218ENST00000566926 Q6ZRG5 221 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 C19orf35Q6ZS72 473 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 PRR25Q96S07 402 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 MED9Q9NWA0 146 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 SLC45A2Q9UMX9 530 aa10.24□□□□□ -0.77
CLK3-218ENST00000566926 IGLV1-51P01701 117 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 OR10J1P30954 320 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 B2MP61769 119 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 PRR20EP86478 221 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 PRR20CP86479 221 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 PRR20DP86480 221 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 PRR20BP86481 221 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 PRR20AP86496 221 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 FAM106AQ4KMX7 169 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 FFAR4Q5NUL3 377 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 S100A7AQ86SG5 101 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms