RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 FAM78BQ5VT40 261 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 LCNL1Q6ZST4 164 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 MIR17HGQ75NE6 70 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 ZNF329Q86UD4 541 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 ZNF502Q8TBZ5 544 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 TMPRSS5Q9H3S3 457 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 HIVEP2P31629 2446 aa13.77□□□□□ -0.21
HERC2-208ENST00000566635 TPPP2P59282 170 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 RHOBP62745 196 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 C10orf99Q6UWK7 81 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 PATE2Q6UY27 113 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 CCDC140Q96MF4 163 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 SCRT1Q9BWW7 348 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 KLK15Q9H2R5 256 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 ZNF580Q9UK33 172 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 GPR183P32249 361 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 UHRF2Q96PU4 802 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 C12orf57Q99622 126 aa13.76□□□□□ -0.21
HERC2-208ENST00000566635 COX7A2P2O60397 106 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 IGLV1-40P01703 118 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 OR5G3P0C626 314 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 PF4V1P10720 104 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 ORM2P19652 201 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 GUK1Q16774 197 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 MORN5Q5VZ52 161 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 UQCC3Q6UW78 93 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 COMMD1Q8N668 190 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 OR1B1Q8NGR6 318 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 FUT9Q9Y231 359 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 F8W036 122 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 LYZP61626 148 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 HAGHQ16775 308 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 RARRES2Q99969 163 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 CHRDL1Q9BU40 450 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 GNG13Q9P2W3 67 aa13.75□□□□□ -0.21
HERC2-208ENST00000566635 FAM181BA6NEQ2 426 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 FAM223BA6NKX1 122 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 H3BUA1 57 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 STAG3L2P0CL84 134 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 STAG3L3P0CL85 134 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 RD3LP0DJH9 198 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 ARL14EPLP0DKL9 152 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 FCGR2BP31994 310 aaPredicted RBP13.74□□□□□ -0.21
HERC2-208ENST00000566635 ADMP35318 185 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 ATP5G2Q06055 141 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 FAM223AQ8IWN6 122 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 EEF1AKMT3Q96AZ1 226 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 TXN2Q99757 166 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 CDC42EP3Q9UKI2 254 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 NF1P21359 2839 aa13.74□□□□□ -0.21
HERC2-208ENST00000566635 TRAV30A0A087WSZ9 112 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 C9JQL5 133 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 TOMM40O96008 361 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 CTSGP08311 255 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 C10orf113Q5VZT2 155 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 LINC00469Q8N7U9 141 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 OR1L4Q8NGR5 311 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 PFDN5Q99471 154 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 EIF5A2Q9GZV4 153 aaKnown RBP13.73□□□□□ -0.21
HERC2-208ENST00000566635 DNAJC4Q9NNZ3 241 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 TREM1Q9NP99 234 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 NSD1Q96L73 2696 aaPredicted RBP13.73□□□□□ -0.21
HERC2-208ENST00000566635 INAFM1C9JVW0 142 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 CLEC3BP05452 202 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 SCGB2A2Q13296 93 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 GATAD1Q8WUU5 269 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 NARS2Q96I59 477 aaKnown RBP13.73□□□□□ -0.21
HERC2-208ENST00000566635 PBDC1Q9BVG4 233 aa13.73□□□□□ -0.21
HERC2-208ENST00000566635 TRAV5A0A0B4J249 113 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 BRI3O95415 125 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 CD5P06127 495 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 YPEL3P61236 119 aaPredicted RBP13.72□□□□□ -0.21
HERC2-208ENST00000566635 Q8N2B8 174 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 OR51G1Q8NGK1 321 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 ZNF414Q96IQ9 312 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 C19orf24Q9BVV8 132 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 IGHV3-35A0A0C4DH35 117 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 RBFOX3A6NFN3 312 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 IGHV3-11P01762 117 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 FABP1P07148 127 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 FOSL1P15407 271 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 PLP1P60201 277 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 LINC00305Q7Z4B0 112 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 BIN3Q9NQY0 253 aa13.72□□□□□ -0.21
HERC2-208ENST00000566635 TRBV7-1A0A0A6YYK4 115 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 PPP5D1E7EU14 171 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 HYPMO75409 117 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 IGHG4P01861 327 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 IL4P05112 153 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 RAB9AP51151 201 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 MRPL32Q9BYC8 188 aaKnown RBP13.71□□□□□ -0.21
HERC2-208ENST00000566635 GNB4Q9HAV0 340 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 MLXQ9UH92 298 aa13.71□□□□□ -0.21
HERC2-208ENST00000566635 LOC102723971A0A1B0GUV8 181 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 TGOLN2O43493 480 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 PSMB8P28062 276 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 RPL35P42766 123 aaKnown RBP13.7□□□□□ -0.22
HERC2-208ENST00000566635 MEOX2P50222 304 aa13.7□□□□□ -0.22
HERC2-208ENST00000566635 ICAM4Q14773 271 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms