RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 TMEM178BH3BS89 294 aa11.46□□□□□ -0.58
CDH1-209ENST00000566510 IGLV2-23P01705 113 aa11.46□□□□□ -0.58
CDH1-209ENST00000566510 IGFL3Q6UXB1 125 aa11.46□□□□□ -0.58
CDH1-209ENST00000566510 TCF24Q7RTU0 167 aa11.46□□□□□ -0.58
CDH1-209ENST00000566510 EPDR1Q9UM22 224 aa11.46□□□□□ -0.58
CDH1-209ENST00000566510 ZZEF1O43149 2961 aa11.46□□□□□ -0.58
CDH1-209ENST00000566510 MALRD1Q5VYJ5 2156 aa11.46□□□□□ -0.58
CDH1-209ENST00000566510 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 OR4A5Q8NH83 315 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 FAM57AQ8TBR7 257 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 PERPQ96FX8 193 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 UQCR10Q9UDW1 63 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 C22orf46C9J442 243 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 CTRLP40313 264 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 HNRNPA3P51991 378 aaKnown RBP11.45□□□□□ -0.58
CDH1-209ENST00000566510 Q56UQ5 140 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 FAM231DQ6ZW35 169 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 MRPL52Q86TS9 123 aaKnown RBP11.45□□□□□ -0.58
CDH1-209ENST00000566510 MBD6Q96DN6 1003 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 CLEC7AQ9BXN2 247 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 GSX1Q9H4S2 264 aaPredicted RBP11.45□□□□□ -0.58
CDH1-209ENST00000566510 APC2O95996 2303 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 ZNF318Q5VUA4 2279 aa11.45□□□□□ -0.58
CDH1-209ENST00000566510 ZFHX2Q9C0A1 2572 aaPredicted RBP11.45□□□□□ -0.58
CDH1-209ENST00000566510 A0A0G2JNJ9 132 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 HYPMO75409 117 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 NBEAP1P0C6P0 100 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 CD24P25063 80 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 C22orf15Q8WYQ4 148 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 Q9UFV3 132 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 TOX4O94842 621 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 FAM87AP0C7U9 286 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 THAP8Q8NA92 274 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 CTSZQ9UBR2 303 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 ZNF835Q9Y2P0 537 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 BSNQ9UPA5 3926 aa11.44□□□□□ -0.58
CDH1-209ENST00000566510 INS-IGF2F8WCM5 200 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 FSTL3O95633 263 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 IGLC3P0DOY3 106 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 CNTFRP26992 372 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
CDH1-209ENST00000566510 RASL11AQ6T310 242 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 WIPF2Q8TF74 440 aaPredicted RBP11.43□□□□□ -0.58
CDH1-209ENST00000566510 CHRDL1Q9BU40 450 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 DYNLRB1Q9NP97 96 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
CDH1-209ENST00000566510 KLK10O43240 276 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 PMCHL1Q16048 86 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 ETFRF1Q6IPR1 90 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 ST6GALNAC6Q969X2 333 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 VWC2LB2RUY7 222 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 MC5RP33032 325 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 KLHDC1Q8N7A1 406 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 STXBP6Q8NFX7 210 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 PGLYRP4Q96LB8 373 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 GPR82Q96P67 336 aa11.43□□□□□ -0.58
CDH1-209ENST00000566510 ALKBH7Q9BT30 221 aaPredicted RBP11.43□□□□□ -0.58
CDH1-209ENST00000566510 ZNF292O60281 2723 aa11.42□□□□□ -0.58
CDH1-209ENST00000566510 PRRG2O14669 202 aa11.42□□□□□ -0.58
CDH1-209ENST00000566510 LOXP28300 417 aaPredicted RBP11.42□□□□□ -0.58
CDH1-209ENST00000566510 LINC00322Q6ZN03 302 aaPredicted RBP11.42□□□□□ -0.58
CDH1-209ENST00000566510 DAZAP1Q96EP5 407 aaKnown RBP11.42□□□□□ -0.58
CDH1-209ENST00000566510 IGLC7A0M8Q6 106 aa11.42□□□□□ -0.58
CDH1-209ENST00000566510 M0QZ24 198 aa11.42□□□□□ -0.58
CDH1-209ENST00000566510 P01737 135 aa11.42□□□□□ -0.58
CDH1-209ENST00000566510 PRB4P10163 310 aaPredicted RBP11.42□□□□□ -0.58
CDH1-209ENST00000566510 RPL27AP46776 148 aaKnown RBP11.42□□□□□ -0.58
CDH1-209ENST00000566510 IGHV1-8P0DP01 117 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 ZNF137PP52743 207 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 EBLN2Q6P2I7 272 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 C11orf42Q8N5U0 333 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 RPP21Q9H633 154 aaKnown RBP11.41□□□□□ -0.58
CDH1-209ENST00000566510 CLEC5AQ9NY25 188 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 LAMTOR2Q9Y2Q5 125 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 LRBAP50851 2863 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 THBDP07204 575 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 BTF3P20290 206 aaKnown RBP11.41□□□□□ -0.58
CDH1-209ENST00000566510 MYCNOSP40205 109 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 LGALS7P47929 136 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 STPG4Q8N801 248 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 Q9H3A6 140 aa11.41□□□□□ -0.58
CDH1-209ENST00000566510 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
CDH1-209ENST00000566510 SH2D7A6NKC9 451 aaPredicted RBP11.4□□□□□ -0.58
CDH1-209ENST00000566510 HINT1P49773 126 aaPredicted RBP11.4□□□□□ -0.58
CDH1-209ENST00000566510 LYZP61626 148 aa11.4□□□□□ -0.58
CDH1-209ENST00000566510 HBBP68871 147 aa11.4□□□□□ -0.58
CDH1-209ENST00000566510 LINC00311Q8N616 119 aa11.4□□□□□ -0.58
CDH1-209ENST00000566510 C7orf69Q9H7B7 122 aa11.4□□□□□ -0.58
CDH1-209ENST00000566510 A8MWL6 223 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 VSTM5A8MXK1 200 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 FAM71F2Q6NXP2 309 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 SSX8Q7RTT4 187 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 ASCL5Q7RTU5 278 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 RNASE6Q93091 150 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms