RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 C1QTNF4Q9BXJ3 329 aa8.66□□□□□ -1.02
UBR1-206ENST00000566493 MRPS26Q9BYN8 205 aaKnown RBP8.66□□□□□ -1.02
UBR1-206ENST00000566493 CLEC5AQ9NY25 188 aa8.66□□□□□ -1.02
UBR1-206ENST00000566493 PFDN2Q9UHV9 154 aa8.66□□□□□ -1.02
UBR1-206ENST00000566493 SCP2D1Q9UJQ7 156 aa8.66□□□□□ -1.02
UBR1-206ENST00000566493 APLNQ9ULZ1 77 aa8.66□□□□□ -1.02
UBR1-206ENST00000566493 A6NHS1 94 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 FAM90A26D6RGX4 464 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 TOMM40O96008 361 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 NUP62P37198 522 aaPredicted RBP8.65□□□□□ -1.02
UBR1-206ENST00000566493 CCR6P51684 374 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 USF2Q15853 346 aaPredicted RBP8.65□□□□□ -1.02
UBR1-206ENST00000566493 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 SEPSECSQ9HD40 501 aaKnown RBP8.65□□□□□ -1.02
UBR1-206ENST00000566493 NRN1Q9NPD7 142 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 U3KQ87 197 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 X6R8D5 127 aa8.65□□□□□ -1.02
UBR1-206ENST00000566493 BUB3O43684 328 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 PSG1P11464 419 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 ANXA3P12429 323 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 KLF9Q13886 244 aaPredicted RBP8.64□□□□□ -1.03
UBR1-206ENST00000566493 SMCO1Q147U7 214 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 SPCS2Q15005 226 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 NMSQ5H8A3 153 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 Q6ZTC4 211 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 LGI3Q8N145 548 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 TMEM170AQ8WVE7 144 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
UBR1-206ENST00000566493 RSL24D1Q9UHA3 163 aaKnown RBP8.64□□□□□ -1.03
UBR1-206ENST00000566493 DNAH10Q8IVF4 4471 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 IGHV4-4A0A075B6R2 117 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 PIGBOS1A0A0B4J2F0 54 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 ANKRD20A5PA0PJZ0 165 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 ZFP92A6NM28 416 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 AKR1C4P17516 323 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 ALDH3B2P48448 385 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 ATP5IP56385 69 aaPredicted RBP8.63□□□□□ -1.03
UBR1-206ENST00000566493 SRPXP78539 464 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 OR51G1Q8NGK1 321 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 DTD1Q8TEA8 209 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 RNF125Q96EQ8 232 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 SLC35E1Q96K37 410 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 PBDC1Q9BVG4 233 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 RBKSQ9H477 322 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 PRR13Q9NZ81 148 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 XCL2Q9UBD3 114 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 HSPB7Q9UBY9 170 aa8.63□□□□□ -1.03
UBR1-206ENST00000566493 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 DEFB131BA0A096LNP1 70 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 A0A0B4J2A0 478 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 H3BMM0 161 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 FABP1P07148 127 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 GPX4P36969 197 aaPredicted RBP8.62□□□□□ -1.03
UBR1-206ENST00000566493 ID1P41134 155 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 LYZL2Q7Z4W2 148 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 OR1S1Q8NH92 325 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 RAB2BQ8WUD1 216 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 LINC00052Q96N35 136 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 RNF126Q9BV68 326 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 CCDC59Q9P031 241 aaKnown RBP8.62□□□□□ -1.03
UBR1-206ENST00000566493 SHPKQ9UHJ6 478 aa8.62□□□□□ -1.03
UBR1-206ENST00000566493 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
UBR1-206ENST00000566493 NOL3O60936 208 aaKnown RBP8.61□□□□□ -1.03
UBR1-206ENST00000566493 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
UBR1-206ENST00000566493 NKX2-1P43699 371 aaPredicted RBP8.61□□□□□ -1.03
UBR1-206ENST00000566493 RAB11AP62491 216 aa8.61□□□□□ -1.03
UBR1-206ENST00000566493 OR8G2PQ6IF36 304 aa8.61□□□□□ -1.03
UBR1-206ENST00000566493 DYNC2LI1Q8TCX1 351 aa8.61□□□□□ -1.03
UBR1-206ENST00000566493 PPP1R14BQ96C90 147 aa8.61□□□□□ -1.03
UBR1-206ENST00000566493 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
UBR1-206ENST00000566493 FABP12A6NFH5 140 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 SNRPGP15A8MWD9 76 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 FAUP35544 74 aaKnown RBP8.6□□□□□ -1.03
UBR1-206ENST00000566493 TMBIM6P55061 237 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 ZNF90Q03938 601 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 GAMTQ14353 236 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 C12orf74Q32Q52 190 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 ZNF767PQ75MW2 155 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 COQ8AQ8NI60 647 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 BCL7BQ9BQE9 202 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 CELA1Q9UNI1 258 aa8.6□□□□□ -1.03
UBR1-206ENST00000566493 TMEM189A5PLL7 270 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 P0DMU3 169 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 FAM231AP0DMU4 169 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 FAM231CP0DMU5 169 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 PSMB3P49720 205 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 LYZP61626 148 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 SUPT4H1P63272 117 aaKnown RBP8.59□□□□□ -1.03
UBR1-206ENST00000566493 C1orf194Q5T5A4 169 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 FOXI2Q6ZQN5 318 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 TMED4Q7Z7H5 227 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 NDUFAF3Q9BU61 184 aa8.59□□□□□ -1.03
UBR1-206ENST00000566493 SAV1Q9H4B6 383 aaPredicted RBP8.59□□□□□ -1.03
UBR1-206ENST00000566493 PAIP2BQ9ULR5 123 aaKnown RBP8.59□□□□□ -1.03
UBR1-206ENST00000566493 IGHV3OR16-12A0A075B7B8 117 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 DUXBA0A1W2PPF3 345 aa8.58□□□□□ -1.04
UBR1-206ENST00000566493 AMBPP02760 352 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms