RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 AP2S1P53680 142 aaPredicted RBP13.29□□□□□ -0.28
USB1-213ENST00000566292 TMEM41BQ5BJD5 291 aa13.29□□□□□ -0.28
USB1-213ENST00000566292 OR51G1Q8NGK1 321 aa13.29□□□□□ -0.28
USB1-213ENST00000566292 X6R8D5 127 aa13.29□□□□□ -0.28
USB1-213ENST00000566292 DNAH10Q8IVF4 4471 aa13.29□□□□□ -0.28
USB1-213ENST00000566292 FAM90A26D6RGX4 464 aa13.28□□□□□ -0.28
USB1-213ENST00000566292 ANXA3P12429 323 aa13.28□□□□□ -0.28
USB1-213ENST00000566292 SRPXP78539 464 aa13.28□□□□□ -0.28
USB1-213ENST00000566292 SIGLEC15Q6ZMC9 328 aa13.28□□□□□ -0.28
USB1-213ENST00000566292 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
USB1-213ENST00000566292 NRN1Q9NPD7 142 aa13.28□□□□□ -0.28
USB1-213ENST00000566292 CLEC5AQ9NY25 188 aa13.28□□□□□ -0.28
USB1-213ENST00000566292 DNAH6Q9C0G6 4158 aa13.27□□□□□ -0.28
USB1-213ENST00000566292 IGKV1D-37A0A075B6S9 117 aa13.27□□□□□ -0.29
USB1-213ENST00000566292 PITX3O75364 302 aa13.27□□□□□ -0.29
USB1-213ENST00000566292 OR1S1Q8NH92 325 aa13.27□□□□□ -0.29
USB1-213ENST00000566292 C2CD4CQ8TF44 421 aa13.27□□□□□ -0.29
USB1-213ENST00000566292 RNF125Q96EQ8 232 aa13.27□□□□□ -0.29
USB1-213ENST00000566292 HRH4Q9H3N8 390 aa13.27□□□□□ -0.29
USB1-213ENST00000566292 V9GYH0 126 aa13.27□□□□□ -0.29
USB1-213ENST00000566292 MIFP14174 115 aa13.26□□□□□ -0.29
USB1-213ENST00000566292 FAUP35544 74 aaKnown RBP13.26□□□□□ -0.29
USB1-213ENST00000566292 GPX4P36969 197 aaPredicted RBP13.26□□□□□ -0.29
USB1-213ENST00000566292 ZNF90Q03938 601 aa13.26□□□□□ -0.29
USB1-213ENST00000566292 GAMTQ14353 236 aa13.26□□□□□ -0.29
USB1-213ENST00000566292 ZNF79Q15937 498 aa13.26□□□□□ -0.29
USB1-213ENST00000566292 PYDC2Q56P42 97 aa13.26□□□□□ -0.29
USB1-213ENST00000566292 TMED4Q7Z7H5 227 aa13.26□□□□□ -0.29
USB1-213ENST00000566292 SEPSECSQ9HD40 501 aaKnown RBP13.26□□□□□ -0.29
USB1-213ENST00000566292 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
USB1-213ENST00000566292 DUXBA0A1W2PPF3 345 aa13.25□□□□□ -0.29
USB1-213ENST00000566292 ATP5IP56385 69 aaPredicted RBP13.25□□□□□ -0.29
USB1-213ENST00000566292 SNRPD3P62318 126 aaKnown RBP13.25□□□□□ -0.29
USB1-213ENST00000566292 TMEM128Q5BJH2 165 aa13.25□□□□□ -0.29
USB1-213ENST00000566292 TOMM5Q8N4H5 51 aa13.25□□□□□ -0.29
USB1-213ENST00000566292 PBDC1Q9BVG4 233 aa13.25□□□□□ -0.29
USB1-213ENST00000566292 ZFP92A6NM28 416 aa13.24□□□□□ -0.29
USB1-213ENST00000566292 H3BMM0 161 aa13.24□□□□□ -0.29
USB1-213ENST00000566292 IAPPP10997 89 aa13.24□□□□□ -0.29
USB1-213ENST00000566292 OR8G2PQ6IF36 304 aa13.24□□□□□ -0.29
USB1-213ENST00000566292 LRTM2Q8N967 370 aa13.24□□□□□ -0.29
USB1-213ENST00000566292 SLC35E1Q96K37 410 aa13.24□□□□□ -0.29
USB1-213ENST00000566292 TBC1D24Q9ULP9 559 aa13.24□□□□□ -0.29
USB1-213ENST00000566292 VAMP1P23763 118 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 HLA-DMBP28068 263 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 AP3S2P59780 193 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 PRR20EP86478 221 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 PRR20CP86479 221 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 PRR20DP86480 221 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 PRR20BP86481 221 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 PRR20AP86496 221 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 WDR12Q9GZL7 423 aaKnown RBP13.23□□□□□ -0.29
USB1-213ENST00000566292 APLNQ9ULZ1 77 aa13.23□□□□□ -0.29
USB1-213ENST00000566292 PIGBOS1A0A0B4J2F0 54 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 IGLL5B9A064 214 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 C11orf94C9JXX5 98 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 SLC25A6P12236 298 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 HLA-DRB4P13762 266 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 NUP62P37198 522 aaPredicted RBP13.22□□□□□ -0.29
USB1-213ENST00000566292 TCTAP57738 103 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 DEFB1P60022 68 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 Q6ZTC4 211 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 XCL2Q9UBD3 114 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 CELA1Q9UNI1 258 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 HLA-DRB4X5D2U9 266 aa13.22□□□□□ -0.29
USB1-213ENST00000566292 IGKV1OR2-108A0A075B7D4 117 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 SFT2D2O95562 160 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 NKX2-1P43699 371 aaPredicted RBP13.21□□□□□ -0.29
USB1-213ENST00000566292 LYZP61626 148 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 PPP1R1AQ13522 171 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 OR2F1Q13607 317 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 GSG1LQ6UXU4 331 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 CCDC190Q86UF4 302 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 TRGV9Q99603 122 aa13.21□□□□□ -0.29
USB1-213ENST00000566292 SLC25A21Q9BQT8 299 aaPredicted RBP13.21□□□□□ -0.29
USB1-213ENST00000566292 SOCS3O14543 225 aa13.2□□□□□ -0.3
USB1-213ENST00000566292 NUTF2P61970 127 aaKnown RBP13.2□□□□□ -0.3
USB1-213ENST00000566292 RAB11AP62491 216 aa13.2□□□□□ -0.3
USB1-213ENST00000566292 THAP8Q8NA92 274 aa13.2□□□□□ -0.3
USB1-213ENST00000566292 C1QTNF4Q9BXJ3 329 aa13.2□□□□□ -0.3
USB1-213ENST00000566292 MAGT1Q9H0U3 335 aa13.2□□□□□ -0.3
USB1-213ENST00000566292 PAIP2BQ9ULR5 123 aaKnown RBP13.2□□□□□ -0.3
USB1-213ENST00000566292 SNRPGP15A8MWD9 76 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 PRSS46E5RG02 174 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 MED6O75586 246 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 S100A5P33763 92 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 C1orf194Q5T5A4 169 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 DEDD2Q8WXF8 326 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 TMED3Q9Y3Q3 217 aa13.19□□□□□ -0.3
USB1-213ENST00000566292 TRAV10A0A0B4J240 114 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 CCDC160A6NGH7 325 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 SYNGR2O43760 224 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 FABP1P07148 127 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 HOXB5P09067 269 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 LINC00052Q96N35 136 aa13.18□□□□□ -0.3
USB1-213ENST00000566292 RBM38Q9H0Z9 239 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms