RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 C1orf194Q5T5A4 169 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 LEMD1Q68G75 181 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 LYZL2Q7Z4W2 148 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 OR51G1Q8NGK1 321 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 MCFD2Q8NI22 146 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 TRIM63Q969Q1 353 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 NRN1Q9NPD7 142 aa11.04□□□□□ -0.64
CMTM3-212ENST00000566121 NOL3O60936 208 aaKnown RBP11.03□□□□□ -0.64
CMTM3-212ENST00000566121 LY6G6CO95867 125 aa11.03□□□□□ -0.64
CMTM3-212ENST00000566121 CFDP00746 253 aaPredicted RBP11.03□□□□□ -0.64
CMTM3-212ENST00000566121 IFNA10P01566 189 aa11.03□□□□□ -0.64
CMTM3-212ENST00000566121 IL4P05112 153 aa11.03□□□□□ -0.64
CMTM3-212ENST00000566121 PSG1P11464 419 aa11.03□□□□□ -0.64
CMTM3-212ENST00000566121 SNRPD3P62318 126 aaKnown RBP11.03□□□□□ -0.64
CMTM3-212ENST00000566121 RAB40CQ96S21 281 aa11.03□□□□□ -0.64
CMTM3-212ENST00000566121 C1QTNF4Q9BXJ3 329 aa11.03□□□□□ -0.64
CMTM3-212ENST00000566121 TMED3Q9Y3Q3 217 aa11.03□□□□□ -0.64
CMTM3-212ENST00000566121 FABP1P07148 127 aa11.02□□□□□ -0.65
CMTM3-212ENST00000566121 AKR1C4P17516 323 aa11.02□□□□□ -0.65
CMTM3-212ENST00000566121 NKX2-1P43699 371 aaPredicted RBP11.02□□□□□ -0.65
CMTM3-212ENST00000566121 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
CMTM3-212ENST00000566121 NUTF2P61970 127 aaKnown RBP11.02□□□□□ -0.65
CMTM3-212ENST00000566121 DHRS2Q13268 280 aa11.02□□□□□ -0.65
CMTM3-212ENST00000566121 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.65
CMTM3-212ENST00000566121 RBKSQ9H477 322 aa11.02□□□□□ -0.65
CMTM3-212ENST00000566121 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
CMTM3-212ENST00000566121 SLC45A2Q9UMX9 530 aa11.02□□□□□ -0.65
CMTM3-212ENST00000566121 ZNF701M0R085 212 aaPredicted RBP11.01□□□□□ -0.65
CMTM3-212ENST00000566121 ZNF688P0C7X2 276 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 GAMTQ14353 236 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 SPATA31B1PQ5VZV4 182 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 SIGLEC15Q6ZMC9 328 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 TOMM5Q8N4H5 51 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 C2CD4CQ8TF44 421 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 RNF125Q96EQ8 232 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 CIB3Q96Q77 187 aaPredicted RBP11.01□□□□□ -0.65
CMTM3-212ENST00000566121 NEU1Q99519 415 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 FBXL17Q9UF56 701 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 X6R8D5 127 aa11.01□□□□□ -0.65
CMTM3-212ENST00000566121 IGKV1D-37A0A075B6S9 117 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 H3BMM0 161 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 MED6O75586 246 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 NANOS2P60321 138 aaKnown RBP11□□□□□ -0.65
CMTM3-212ENST00000566121 RAB11AP62491 216 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 CCDC190Q86UF4 302 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 THAP8Q8NA92 274 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 ACY3Q96HD9 319 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 TRGV9Q99603 122 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 V9GYH0 126 aa11□□□□□ -0.65
CMTM3-212ENST00000566121 FAT2Q9NYQ8 4349 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 SNRPGP15A8MWD9 76 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 RBMY1A1P0DJD3 496 aaKnown RBP10.99□□□□□ -0.65
CMTM3-212ENST00000566121 RBMY1CP0DJD4 496 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 HLA-DRB4P13762 266 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 RPP30P78346 268 aaKnown RBP10.99□□□□□ -0.65
CMTM3-212ENST00000566121 RBMY1FQ15415 496 aaKnown RBP10.99□□□□□ -0.65
CMTM3-212ENST00000566121 ACTL10Q5JWF8 245 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 OR1S1Q8NH92 325 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 TBC1D24Q9ULP9 559 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 HLA-DRB4X5D2U9 266 aa10.99□□□□□ -0.65
CMTM3-212ENST00000566121 IGHV4-28A0A0C4DH34 117 aa10.98□□□□□ -0.65
CMTM3-212ENST00000566121 KNCNA6PVL3 124 aa10.98□□□□□ -0.65
CMTM3-212ENST00000566121 C4BPBP20851 252 aa10.98□□□□□ -0.65
CMTM3-212ENST00000566121 S100A5P33763 92 aa10.98□□□□□ -0.65
CMTM3-212ENST00000566121 PSMG4Q5JS54 123 aa10.98□□□□□ -0.65
CMTM3-212ENST00000566121 SLC35E1Q96K37 410 aa10.98□□□□□ -0.65
CMTM3-212ENST00000566121 SMIM9A6NGZ8 99 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 ZFP92A6NM28 416 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 PRSS46E5RG02 174 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 SFT2D2O95562 160 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 S100A7P31151 101 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 ID1P41134 155 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 PSMB3P49720 205 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 ZNF79Q15937 498 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 PYDC2Q56P42 97 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 GGNBP1Q5YKI7 109 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 APLNQ9ULZ1 77 aa10.97□□□□□ -0.65
CMTM3-212ENST00000566121 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
CMTM3-212ENST00000566121 ISLRO14498 428 aa10.96□□□□□ -0.65
CMTM3-212ENST00000566121 SOCS3O14543 225 aa10.96□□□□□ -0.65
CMTM3-212ENST00000566121 MEOX2P50222 304 aa10.96□□□□□ -0.65
CMTM3-212ENST00000566121 ZNF705AQ6ZN79 300 aaPredicted RBP10.96□□□□□ -0.65
CMTM3-212ENST00000566121 FOXI2Q6ZQN5 318 aa10.96□□□□□ -0.65
CMTM3-212ENST00000566121 OR4D5Q8NGN0 318 aa10.96□□□□□ -0.65
CMTM3-212ENST00000566121 RBM38Q9H0Z9 239 aaKnown RBP10.96□□□□□ -0.65
CMTM3-212ENST00000566121 IGKV1OR2-108A0A075B7D4 117 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 TRAV10A0A0B4J240 114 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 A8MTW9 85 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 SYNGR2O43760 224 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 PAX9P55771 341 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 ID3Q02535 119 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 ZNF90Q03938 601 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 CNPY1Q3B7I2 92 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 CENPSQ8N2Z9 138 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
CMTM3-212ENST00000566121 SAV1Q9H4B6 383 aaPredicted RBP10.95□□□□□ -0.66
CMTM3-212ENST00000566121 ELOA3CA0A087WX78 387 aaPredicted RBP10.94□□□□□ -0.66
CMTM3-212ENST00000566121 TMEM189A5PLL7 270 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms