RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PRB4P10163 310 aaPredicted RBP4.88□□□□□ -1.63
CHD9-217ENST00000565832 BCL2P10415 239 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 ORM2P19652 201 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 NPPCP23582 126 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 ZNF506Q5JVG8 444 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 LEMD1Q68G75 181 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 CYP2G1PQ6ZSU1 146 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 IL17RELQ6ZVW7 336 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 CBLN2Q8IUK8 224 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 C5orf56Q8N8D9 126 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 ZNF114Q8NC26 417 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 TMEM116Q8NCL8 245 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 ZNF503Q96F45 646 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 MS4A10Q96PG2 267 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 MEGF9Q9H1U4 602 aa4.88□□□□□ -1.63
CHD9-217ENST00000565832 BEX4Q9NWD9 120 aaPredicted RBP4.88□□□□□ -1.63
CHD9-217ENST00000565832 IGHV3OR16-8A0A075B7F1 116 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 TCRBV4S1A1TA0A5B7 111 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 BTBD17A6NE02 478 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 FNDC10F2Z333 226 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 STAG3L2P0CL84 134 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 STAG3L3P0CL85 134 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 LOXL1Q08397 574 aaPredicted RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 DEFB112Q30KQ8 113 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 TIGITQ495A1 244 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 C9orf152Q5JTZ5 239 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 SOHLH1Q5JUK2 328 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 CST9LP1Q5W188 147 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 SPNS3Q6ZMD2 512 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 SVBPQ8N300 66 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 OR4X1Q8NH49 305 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 NOL4LQ96MY1 436 aaPredicted RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 RBM14Q96PK6 669 aaKnown RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 NKX6-2Q9C056 277 aaPredicted RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 DNAJC4Q9NNZ3 241 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 ZNF355PQ9NSJ1 428 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 CDC42EP3Q9UKI2 254 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 CARHSP1Q9Y2V2 147 aaKnown RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 HIVEP1P15822 2718 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 IGKV1-17P01599 117 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 IGHV4-59P01825 116 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 HLA-DRB1P01911 266 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 OR5G3P0C626 314 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 PSG1P11464 419 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 ATP5G3P48201 142 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 KHDC3LQ587J8 217 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 FAM90A2PQ658T7 463 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 UNQ5815/PRO19632Q6UWF5 114 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 TTC9CQ8N5M4 171 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 THAP8Q8NA92 274 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 OR1B1Q8NGR6 318 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 OR4F5Q8NH21 305 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 DUX5Q96PT3 197 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 OR4F4Q96R69 305 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 AURKAIP1Q9NWT8 199 aaPredicted RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 C1RLQ9NZP8 487 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 VAX2Q9UIW0 290 aa4.87□□□□□ -1.63
CHD9-217ENST00000565832 YTHDF2Q9Y5A9 579 aaKnown RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 ANK3Q12955 4377 aaKnown RBP4.87□□□□□ -1.63
CHD9-217ENST00000565832 IGLV11-55A0A075B6I3 123 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 OR2T8A6NH00 312 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 ZNF727A8MUV8 499 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 H3BQ15 152 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 H3BTX0 84 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 M0R036 132 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 DNASE2O00115 360 aaPredicted RBP4.86□□□□□ -1.63
CHD9-217ENST00000565832 IGLC1P0CG04 106 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 PYYP10082 97 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 RHOBP62745 196 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 MEF2BQ02080 365 aaPredicted RBP4.86□□□□□ -1.63
CHD9-217ENST00000565832 ZNF674Q2M3X9 581 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 LINC00305Q7Z4B0 112 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 SVIPQ8NHG7 77 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 SGMS2Q8NHU3 365 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 RPUSD4Q96CM3 377 aaKnown RBP4.86□□□□□ -1.63
CHD9-217ENST00000565832 DERL1Q9BUN8 251 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 FUT9Q9Y231 359 aa4.86□□□□□ -1.63
CHD9-217ENST00000565832 NPIPB5A8MRT5 1133 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 C11orf94C9JXX5 98 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 OR7C2O60412 319 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 CXorf1O96002 111 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 GCHFRP30047 84 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 PSMB3P49720 205 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 C15orf32Q32M92 178 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 TMEM95Q3KNT9 176 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 AWAT1Q58HT5 328 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 C10orf113Q5VZT2 155 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 ETFRF1Q6IPR1 90 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 RBMS3Q6XE24 437 aaKnown RBP4.85□□□□□ -1.63
CHD9-217ENST00000565832 LRRC75A-AS1Q8N1F1 130 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 LINC00482Q8N8I6 264 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 ISOC2Q96AB3 205 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 FAM167A-AS1Q96KT0 104 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 SLC25A2Q9BXI2 301 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 RPS10P5Q9NQ39 176 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 C7orf77A4D0Y5 90 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 A6NDX4 124 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 PGPEP1LA6NFU8 196 aa4.85□□□□□ -1.63
CHD9-217ENST00000565832 TSPAN4O14817 238 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms