RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 S100A7AQ86SG5 101 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 GNPNAT1Q96EK6 184 aaPredicted RBP5.99□□□□□ -1.45
CDH1-208ENST00000565810 RAX2Q96IS3 184 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 DUX3Q96PT4 197 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 MGST2Q99735 147 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 MDFIQ99750 246 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 GINS3Q9BRX5 216 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 C20orf24Q9BUV8 137 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 NPCDR1Q9BY65 106 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 PFDN2Q9UHV9 154 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 PUS1Q9Y606 427 aaKnown RBP eCLIP5.99□□□□□ -1.45
CDH1-208ENST00000565810 ATRQ13535 2644 aa5.99□□□□□ -1.45
CDH1-208ENST00000565810 TET2Q6N021 2002 aaPredicted RBP5.99□□□□□ -1.45
CDH1-208ENST00000565810 IGKV1OR2-108A0A075B7D4 117 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 TSPAN15O95858 294 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 IL4P05112 153 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 TPT1P13693 172 aaKnown RBP5.98□□□□□ -1.45
CDH1-208ENST00000565810 RPL29P47914 159 aaKnown RBP5.98□□□□□ -1.45
CDH1-208ENST00000565810 NKX2-5P52952 324 aaPredicted RBP5.98□□□□□ -1.45
CDH1-208ENST00000565810 SLURP1P55000 103 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 SYNJ2BPP57105 145 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 LYZP61626 148 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 B2MP61769 119 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 FHL3Q13643 280 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 PXDC1Q5TGL8 231 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 EIF5AL1Q6IS14 154 aaKnown RBP5.98□□□□□ -1.45
CDH1-208ENST00000565810 TOMM20LQ6UXN7 152 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 REC114Q7Z4M0 266 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 SLC51BQ86UW2 128 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 C1QL4Q86Z23 238 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 C9orf62Q8N4C0 152 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 HSD17B11Q8NBQ5 300 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 OR1L4Q8NGR5 311 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 NARS2Q96I59 477 aaKnown RBP5.98□□□□□ -1.45
CDH1-208ENST00000565810 PBDC1Q9BVG4 233 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 ELOVL1Q9BW60 279 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 GGTLC1Q9BX51 225 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 CYTL1Q9NRR1 136 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 PEMTQ9UBM1 199 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 SLC45A2Q9UMX9 530 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 UFC1Q9Y3C8 167 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 TIMM9Q9Y5J7 89 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 PXMP4Q9Y6I8 212 aa5.98□□□□□ -1.45
CDH1-208ENST00000565810 BOLA2-SMG1P6H3BVE0 249 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 K7EMT4 169 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 LGALS9O00182 355 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 OVOL1O14753 267 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 HYPMO75409 117 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 MBP02144 154 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 LINC00869P0C866 280 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 ORM2P19652 201 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 NPPCP23582 126 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 GATA2P23769 480 aaPredicted RBP5.97□□□□□ -1.45
CDH1-208ENST00000565810 ATP6V0CP27449 155 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 BMI1P35226 326 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 ELLP55199 621 aaPredicted RBP5.97□□□□□ -1.45
CDH1-208ENST00000565810 KLF5Q13887 457 aaPredicted RBP5.97□□□□□ -1.45
CDH1-208ENST00000565810 MIC13Q5XKP0 118 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 TMEM182Q6ZP80 229 aaPredicted RBP5.97□□□□□ -1.45
CDH1-208ENST00000565810 STPG3Q8N7X2 389 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 OR1B1Q8NGR6 318 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 TMEM190Q8WZ59 177 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 DLX4Q92988 240 aaPredicted RBP5.97□□□□□ -1.45
CDH1-208ENST00000565810 RNF125Q96EQ8 232 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 METTL26Q96S19 204 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 PFDN5Q99471 154 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 PSMG3Q9BT73 122 aaPredicted RBP5.97□□□□□ -1.45
CDH1-208ENST00000565810 RSG1Q9BU20 258 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 SLC39A9Q9NUM3 307 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 RABAC1Q9UI14 185 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 RNF24Q9Y225 148 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 ANK2Q01484 3957 aa5.97□□□□□ -1.45
CDH1-208ENST00000565810 ELOA3CA0A087WX78 387 aaPredicted RBP5.96□□□□□ -1.46
CDH1-208ENST00000565810 WI2-2373I1.2A0A1W2PRP0 233 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 A0A1W2PS18 150 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 COX7A2P2O60397 106 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 OR5G3P0C626 314 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 PLP1P60201 277 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 SERF2P84101 59 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 PRR20EP86478 221 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 PRR20CP86479 221 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 PRR20DP86480 221 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 PRR20BP86481 221 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 PRR20AP86496 221 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 ACOT6Q3I5F7 207 aaPredicted RBP5.96□□□□□ -1.46
CDH1-208ENST00000565810 FFAR4Q5NUL3 377 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 AKR1C8PQ5T2L2 129 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 LAMTOR1Q6IAA8 161 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 UNQ9165/PRO28630Q6UXU0 137 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 BAP18Q8IXM2 172 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 OR9G4Q8NGQ1 327 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 OR2G3Q8NGZ4 309 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 SPATA3Q8NHX4 192 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 STOML3Q8TAV4 291 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 MARC2Q969Z3 335 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 GRAMD2BQ96HH9 432 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 RCC1LQ96I51 464 aaKnown RBP5.96□□□□□ -1.46
CDH1-208ENST00000565810 RNF2Q99496 336 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 SLC25A32Q9H2D1 315 aa5.96□□□□□ -1.46
CDH1-208ENST00000565810 TMEM231Q9H6L2 316 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms