RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-229	ENST00000565580	CD5	P06127	495 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	ZNF688	P0C7X2	276 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	IGLC1	P0CG04	106 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	AKAIN1	P0CW23	69 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	C4BPB	P20851	252 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	HTR2B	P41595	481 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	RND2	P52198	227 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	MRPS10	P82664	201 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	SSBP1	Q04837	148 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	TMEM187	Q14656	261 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	SURF2	Q15527	256 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	USF2	Q15853	346 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	C2orf83	Q53S99	150 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	TMEM268	Q5VZI3	342 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	PRSS54	Q6PEW0	395 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	TRPT1	Q86TN4	253 aa	Known RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	FAM219A	Q8IW50	185 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	STH	Q8IWL8	128 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580		Q8NAQ8	132 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	OR51S1	Q8NGJ8	323 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	OR52E5	Q8NH55	327 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	C11orf45	Q8TAV5	145 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	DCANP1	Q8TF63	244 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	C15orf40	Q8WUR7	153 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	METTL26	Q96S19	204 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	TMEM231	Q9H6L2	316 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	HEYL	Q9NQ87	328 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	FBXL17	Q9UF56	701 aa		4.63	□□□□□ -1.67
TCF4-229	ENST00000565580	IGHV4-28	A0A0C4DH34	117 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	ANKRD20A5P	A0PJZ0	165 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	CEBPZOS	A8MTT3	80 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	CTDSPL	O15194	276 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	RBMY1A1	P0DJD3	496 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	RBMY1C	P0DJD4	496 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	OR10J1	P30954	320 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	DHODH	Q02127	395 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	IL18	Q14116	193 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	RBMY1F	Q15415	496 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	ACTL10	Q5JWF8	245 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	LGALS9C	Q6DKI2	356 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	TEPP	Q6URK8	271 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	C16orf54	Q6UWD8	224 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	SLC24A4	Q8NFF2	622 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	DYNC2LI1	Q8TCX1	351 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	GLMP	Q8WWB7	406 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	GRAMD2B	Q96HH9	432 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	DIRAS2	Q96HU8	199 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	CLEC5A	Q9NY25	188 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	TMEM56-RWDD3	S4R434	201 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	HECTD4	Q9Y4D8	3996 aa		4.62	□□□□□ -1.67
TCF4-229	ENST00000565580	KIAA1109	Q2LD37	5005 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	TRAV30	A0A087WSZ9	112 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	CCDC160	A6NGH7	325 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	GSTZ1	O43708	216 aa	Predicted RBP	4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	SCGB2A1	O75556	95 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	IL4	P05112	153 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	SULT1A3	P0DMM9	295 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	SULT1A4	P0DMN0	295 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	SLC25A4	P12235	298 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	NPY1R	P25929	384 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	YPEL3	P61236	119 aa	Predicted RBP	4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	SUPT4H1	P63272	117 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	DHRS2	Q13268	280 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	NMS	Q5H8A3	153 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	PSMG4	Q5JS54	123 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	GSG1L	Q6UXU4	331 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	LYZL2	Q7Z4W2	148 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	OR1S2	Q8NGQ3	325 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580		Q8WTZ3	238 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	NPIPB3	Q92617	1050 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	IL22RA2	Q969J5	263 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	ACY3	Q96HD9	319 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	NARS2	Q96I59	477 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	RAB40C	Q96S21	281 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	PRRT1	Q99946	306 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	SOST	Q9BQB4	213 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	SLIRP	Q9GZT3	109 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	MFF	Q9GZY8	342 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	CCDC59	Q9P031	241 aa	Known RBP	4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	DNAH17	Q9UFH2	4485 aa		4.61	□□□□□ -1.67
TCF4-229	ENST00000565580	PCLO	Q9Y6V0	5065 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	HELT	A6NFD8	242 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	C9orf118	A6NHY6	69 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	FAM90A26	D6RGX4	464 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580		H3BMQ9	156 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	BUB3	O43684	328 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	TOMM40	O96008	361 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	IFNA10	P01566	189 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	IFNA4	P05014	189 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	SPP1	P10451	314 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	PSG1	P11464	419 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	AKR1C4	P17516	323 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	TNFSF8	P32971	234 aa		4.6	□□□□□ -1.67
TCF4-229	ENST00000565580	DEFB1	P60022	68 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms