RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 C9orf66Q5T8R8 295 aa19.74■□□□□ 0.75
NME3-208ENST00000565379 TOMM20LQ6UXN7 152 aa19.74■□□□□ 0.75
NME3-208ENST00000565379 IGKV1OR2-108A0A075B7D4 117 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 FXYD6-FXYD2A0A087WZ82 144 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 SEC14L6B5MCN3 397 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 SELENOTP62341 195 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 EGFEM1PQ0D2K5 195 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 UNQ9165/PRO28630Q6UXU0 137 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 TCTE3Q8IZS6 198 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 OR51G1Q8NGK1 321 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 C20orf24Q9BUV8 137 aa19.73■□□□□ 0.75
NME3-208ENST00000565379 LSM4Q9Y4Z0 139 aaKnown RBP19.73■□□□□ 0.75
NME3-208ENST00000565379 G3V3Q6 166 aa19.72■□□□□ 0.75
NME3-208ENST00000565379 MPDU1O75352 247 aa19.72■□□□□ 0.75
NME3-208ENST00000565379 AKAP14Q86UN6 197 aa19.72■□□□□ 0.75
NME3-208ENST00000565379 ZNF414Q96IQ9 312 aa19.72■□□□□ 0.75
NME3-208ENST00000565379 ST6GAL2Q96JF0 529 aa19.72■□□□□ 0.75
NME3-208ENST00000565379 TNFSF18Q9UNG2 199 aa19.72■□□□□ 0.75
NME3-208ENST00000565379 WDR83OSQ9Y284 106 aa19.72■□□□□ 0.75
NME3-208ENST00000565379 C2orf70A6NJV1 201 aa19.71■□□□□ 0.75
NME3-208ENST00000565379 PSG1P11464 419 aa19.71■□□□□ 0.75
NME3-208ENST00000565379 ATP5SQ99766 215 aa19.71■□□□□ 0.75
NME3-208ENST00000565379 ZFAND3Q9H8U3 227 aa19.71■□□□□ 0.75
NME3-208ENST00000565379 MRPL27Q9P0M9 148 aaKnown RBP19.71■□□□□ 0.75
NME3-208ENST00000565379 SAP30O75446 220 aa19.7■□□□□ 0.74
NME3-208ENST00000565379 CSN3P07498 182 aa19.7■□□□□ 0.74
NME3-208ENST00000565379 BMI1P35226 326 aa19.7■□□□□ 0.74
NME3-208ENST00000565379 ZNF90Q03938 601 aa19.7■□□□□ 0.74
NME3-208ENST00000565379 IL34Q6ZMJ4 242 aa19.7■□□□□ 0.74
NME3-208ENST00000565379 CYP2G1PQ6ZSU1 146 aa19.7■□□□□ 0.74
NME3-208ENST00000565379 BPIFCQ8NFQ6 507 aa19.7■□□□□ 0.74
NME3-208ENST00000565379 UBE2L5PA0A1B0GUS4 154 aa19.69■□□□□ 0.74
NME3-208ENST00000565379 TMEM213A2RRL7 107 aa19.69■□□□□ 0.74
NME3-208ENST00000565379 C8orf88P0DMB2 117 aa19.69■□□□□ 0.74
NME3-208ENST00000565379 CLINT1Q14677 625 aa19.69■□□□□ 0.74
NME3-208ENST00000565379 A0A1B0GVG6 124 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 HMSDA8MTL9 139 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 IL4P05112 153 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 FOLR2P14207 255 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 CBLN1P23435 193 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 S100A7P31151 101 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 TM4SF20Q53R12 229 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 BTNL8Q6UX41 500 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 NARS2Q96I59 477 aaKnown RBP19.68■□□□□ 0.74
NME3-208ENST00000565379 METTL26Q96S19 204 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 TECRQ9NZ01 308 aaKnown RBP19.68■□□□□ 0.74
NME3-208ENST00000565379 ZMAT5Q9UDW3 170 aaKnown RBP19.68■□□□□ 0.74
NME3-208ENST00000565379 PFDN2Q9UHV9 154 aa19.68■□□□□ 0.74
NME3-208ENST00000565379 AGPAT2O15120 278 aa19.67■□□□□ 0.74
NME3-208ENST00000565379 IFNA5P01569 189 aa19.67■□□□□ 0.74
NME3-208ENST00000565379 NPPCP23582 126 aa19.67■□□□□ 0.74
NME3-208ENST00000565379 AP2S1P53680 142 aaPredicted RBP19.67■□□□□ 0.74
NME3-208ENST00000565379 RNF125Q96EQ8 232 aa19.67■□□□□ 0.74
NME3-208ENST00000565379 PARD6GQ9BYG4 376 aaPredicted RBP19.67■□□□□ 0.74
NME3-208ENST00000565379 NBEAL2Q6ZNJ1 2754 aa19.66■□□□□ 0.74
NME3-208ENST00000565379 SMLR1H3BR10 107 aa19.66■□□□□ 0.74
NME3-208ENST00000565379 FGF7P21781 194 aa19.66■□□□□ 0.74
NME3-208ENST00000565379 CAMLGP49069 296 aa19.66■□□□□ 0.74
NME3-208ENST00000565379 ZNF266Q14584 549 aa19.66■□□□□ 0.74
NME3-208ENST00000565379 DEFB121Q5J5C9 76 aa19.66■□□□□ 0.74
NME3-208ENST00000565379 PXDC1Q5TGL8 231 aa19.66■□□□□ 0.74
NME3-208ENST00000565379 IGHV7-4-1A0A0J9YVY3 117 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 A0A1W2PS18 150 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 RNF222A6NCQ9 220 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 ARPC5O15511 151 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 OR2F1Q13607 317 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 S100A7AQ86SG5 101 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 OR2K2Q8NGT1 345 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 MGST2Q99735 147 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 MFFQ9GZY8 342 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 TMEM231Q9H6L2 316 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 KCNIP2Q9NS61 270 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 RABAC1Q9UI14 185 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 SLC45A2Q9UMX9 530 aa19.65■□□□□ 0.74
NME3-208ENST00000565379 HNRNPCP07910 306 aaKnown RBP eCLIP19.64■□□□□ 0.73
NME3-208ENST00000565379 CRYBB3P26998 211 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 PLP1P60201 277 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 ZNF345Q14585 488 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 SCGB1C1Q8TD33 95 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 DYNLRB2Q8TF09 96 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 SMIM3Q9BZL3 60 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 WDR61Q9GZS3 305 aaKnown RBP19.64■□□□□ 0.73
NME3-208ENST00000565379 FBXL17Q9UF56 701 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 SMPXQ9UHP9 88 aa19.64■□□□□ 0.73
NME3-208ENST00000565379 IGHV3OR16-8A0A075B7F1 116 aa19.63■□□□□ 0.73
NME3-208ENST00000565379 TAAR5O14804 337 aa19.63■□□□□ 0.73
NME3-208ENST00000565379 CD5P06127 495 aa19.63■□□□□ 0.73
NME3-208ENST00000565379 RPL29P47914 159 aaKnown RBP19.63■□□□□ 0.73
NME3-208ENST00000565379 LYZP61626 148 aa19.63■□□□□ 0.73
NME3-208ENST00000565379 GGTLC1Q9BX51 225 aa19.63■□□□□ 0.73
NME3-208ENST00000565379 C17orf112F2Z3M2 114 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 ZNF207O43670 478 aaKnown RBP19.62■□□□□ 0.73
NME3-208ENST00000565379 IGLV1-51P01701 117 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 C1QBP02746 253 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 LINC00869P0C866 280 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 EIF2B2P49770 351 aaKnown RBP19.62■□□□□ 0.73
NME3-208ENST00000565379 OPCMLQ14982 345 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 USF2Q15853 346 aaPredicted RBP19.62■□□□□ 0.73
NME3-208ENST00000565379 Q6ZRG5 221 aa19.62■□□□□ 0.73
NME3-208ENST00000565379 ZNF709Q8N972 641 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms