RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 DNAH10Q8IVF4 4471 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 HIVEP3Q5T1R4 2406 aa1.18□□□□□ -2.22
PALB2-203ENST00000565038 FN1P02751 2386 aaKnown RBP1.18□□□□□ -2.22
PALB2-203ENST00000565038 CSPG4Q6UVK1 2322 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 DYNC2H1Q8NCM8 4307 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 PLXND1Q9Y4D7 1925 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 ANKHD1Q8IWZ3 2542 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 PKDREJQ9NTG1 2253 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 F8P00451 2351 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 IGHV3-73A0A0B4J1V6 119 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 A0A0J9YY10 115 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 TLCD2A6NGC4 264 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 C2orf74A8MZ97 194 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 M0R381 172 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 UBFD1O14562 309 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 SERPINA7P05543 415 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 CRHBPP24387 322 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 ANP32AP39687 249 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 OR4D2P58180 307 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 TSPEAR-AS2P59090 65 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 TAS2R45P59539 299 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 CXCR4P61073 352 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 BTN3A2P78410 334 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 HLA-DRB3P79483 266 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 MLLT11Q13015 90 aaPredicted RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 MED21Q13503 144 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 JOSD1Q15040 202 aaPredicted RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 RSU1Q15404 277 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 HSP90B2PQ58FF3 399 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 CDKL4Q5MAI5 379 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 SAPCD1Q5SSQ6 148 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 PPP1R2P3Q6NXS1 205 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 AGTRAPQ6RW13 159 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 SCIMPQ6UWF3 145 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 AMTNQ6UX39 209 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 RPS27LQ71UM5 84 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 RPS19BP1Q86WX3 136 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 C1orf174Q8IYL3 243 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 LRRC34Q8IZ02 419 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 SLC35F6Q8N357 371 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 PLPP5Q8NEB5 264 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 RPS4Y2Q8TD47 263 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 C16orf78Q8WTQ4 265 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 SKA2Q8WVK7 121 aaPredicted RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 MAGOHBQ96A72 148 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 PACRGQ96M98 296 aaPredicted RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 OR52B2Q96RD2 323 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 NMNAT3Q96T66 252 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 SELENOSQ9BQE4 189 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 MIEN1Q9BRT3 115 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 KIFC1Q9BW19 673 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 C1QTNF6Q9BXI9 259 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 CDCA4Q9BXL8 241 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 MAP1LC3AQ9H492 121 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 SMDT1Q9H4I9 107 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 BABAM2Q9NXR7 383 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 UBAP1Q9NZ09 502 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 USE1Q9NZ43 259 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 FBXO5Q9UKT4 447 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 PYCARDQ9ULZ3 195 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 HHLA2Q9UM44 414 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 DIDO1Q9BTC0 2240 aaKnown RBP1.17□□□□□ -2.22
PALB2-203ENST00000565038 DNAH3Q8TD57 4116 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 ALPK2Q86TB3 2170 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 COL6A5A8TX70 2615 aa1.17□□□□□ -2.22
PALB2-203ENST00000565038 CCDC88CQ9P219 2028 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 DYNC1H1Q14204 4646 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 HUWE1Q7Z6Z7 4374 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 NYNRINQ9P2P1 1898 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 PRKDCP78527 4128 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 DOCK4Q8N1I0 1966 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 ABCA4P78363 2273 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 TEX50A0A1B0GTY4 177 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 A0A1B0GX78 115 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 C5orf49A4QMS7 147 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 OR11H12B2RN74 326 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 C1QAP02745 245 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 C1QCP02747 245 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 CLPSP04118 112 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 REG1AP05451 166 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 CD7P09564 240 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 MPC1LP0DKB6 136 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 RPS3P23396 243 aaKnown RBP eCLIP1.16□□□□□ -2.22
PALB2-203ENST00000565038 CRYBB3P26998 211 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 RPL12P30050 165 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 CMPK1P30085 196 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 OPRM1P35372 400 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 CD79BP40259 229 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 MAGEA2P43356 314 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 SLCO1A2P46721 670 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 HINT1P49773 126 aaPredicted RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 BASP1P80723 227 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 FABP5Q01469 135 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 TFF3Q07654 80 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 SPA17Q15506 151 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 TSNQ15631 228 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 OGFRL1Q5TC84 451 aaPredicted RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 HIST2H3AQ71DI3 136 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 Q8N402 240 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 TMEM156Q8N614 296 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms