RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NECAP1Q8NC96 275 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 SUN5Q8TC36 379 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 FAM167A-AS1Q96KT0 104 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 ZNF355PQ9NSJ1 428 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 ARL2-SNX15V9GYD0 113 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 F8W735 103 aaPredicted RBP15.31■□□□□ 0.04
CLN6-205ENST00000564846 PDE6DO43924 150 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 UBE2G2P60604 165 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 CST9LP1Q5W188 147 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 ZNF503Q96F45 646 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 UHRF2Q96PU4 802 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 SLC25A2Q9BXI2 301 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 S4R3C0 116 aa15.31■□□□□ 0.04
CLN6-205ENST00000564846 RHOGP84095 191 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 BTN1A1Q13410 526 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 C15orf32Q32M92 178 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 MORN5Q5VZ52 161 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 Q6YL49 198 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 STXBP6Q8NFX7 210 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 OR51G1Q8NGK1 321 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 NIPSNAP3BQ9BS92 247 aa15.3■□□□□ 0.04
CLN6-205ENST00000564846 GCN1Q92616 2671 aaKnown RBP15.3■□□□□ 0.04
CLN6-205ENST00000564846 SMAD7O15105 426 aaKnown RBP15.29■□□□□ 0.04
CLN6-205ENST00000564846 BLCAPP62952 87 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 OR5AU1Q8NGC0 362 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 PRDM13Q9H4Q3 707 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 PUS1Q9Y606 427 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLN6-205ENST00000564846 CELSR1Q9NYQ6 3014 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 CSMD1Q96PZ7 3565 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 TRAV5A0A0B4J249 113 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 H3BQ15 152 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 LYZP61626 148 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 GAR1Q9NY12 217 aaKnown RBP15.29■□□□□ 0.04
CLN6-205ENST00000564846 HIGD1AQ9Y241 93 aa15.29■□□□□ 0.04
CLN6-205ENST00000564846 CSPG4Q6UVK1 2322 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 FAM74A7A6NL05 159 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 F6UZH7 168 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 AP4M1O00189 453 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 BRI3O95415 125 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 ATP5G3P48201 142 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 FAM74A3Q4VXF1 159 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 Q8WTZ3 238 aa15.28■□□□□ 0.04
CLN6-205ENST00000564846 YTHDF2Q9Y5A9 579 aaKnown RBP15.28■□□□□ 0.04
CLN6-205ENST00000564846 UNC79Q9P2D8 2635 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 PDZD2O15018 2839 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 M0R036 132 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 OR2C1O95371 312 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 ZNF502Q8TBZ5 544 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 PAXXQ9BUH6 204 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 OR51M1Q9H341 326 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 MRPL27Q9P0M9 148 aaKnown RBP15.27■□□□□ 0.04
CLN6-205ENST00000564846 ZNF580Q9UK33 172 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 VPREB3Q9UKI3 123 aa15.27■□□□□ 0.04
CLN6-205ENST00000564846 FAM223BA6NKX1 122 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 H3BUA1 57 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 IGHV3-23P01764 117 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 UBE2L3P68036 154 aaKnown RBP15.26■□□□□ 0.03
CLN6-205ENST00000564846 AWAT1Q58HT5 328 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 FAM223AQ8IWN6 122 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 ZNF491Q8N8L2 437 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 EEF1AKMT3Q96AZ1 226 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 RNF125Q96EQ8 232 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 TVP23CQ96ET8 276 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 LINC00527Q9UJ94 153 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 ZANQ9Y493 2812 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 WI2-2373I1.2A0A1W2PRP0 233 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 ZNF727A8MUV8 499 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 NUPL2O15504 423 aaKnown RBP15.26■□□□□ 0.03
CLN6-205ENST00000564846 CTSGP08311 255 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 OR10J4P0C629 311 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 PPIFP30405 207 aaKnown RBP15.26■□□□□ 0.03
CLN6-205ENST00000564846 KIAA0141Q14154 515 aaPredicted RBP15.26■□□□□ 0.03
CLN6-205ENST00000564846 RHEBQ15382 184 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 S100A7AQ86SG5 101 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 MS4A10Q96PG2 267 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 ATP6V0BQ99437 205 aa15.26■□□□□ 0.03
CLN6-205ENST00000564846 TRBV7-1A0A0A6YYK4 115 aa15.25■□□□□ 0.03
CLN6-205ENST00000564846 OR2T8A6NH00 312 aa15.25■□□□□ 0.03
CLN6-205ENST00000564846 IL4P05112 153 aa15.25■□□□□ 0.03
CLN6-205ENST00000564846 SMIM7Q9BQ49 75 aa15.25■□□□□ 0.03
CLN6-205ENST00000564846 SLC25A39Q9BZJ4 359 aaPredicted RBP15.25■□□□□ 0.03
CLN6-205ENST00000564846 PARLQ9H300 379 aa15.25■□□□□ 0.03
CLN6-205ENST00000564846 A0A1W2PRE2 83 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 ATP5G2Q06055 141 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 PNRC1Q12796 327 aaPredicted RBP15.24■□□□□ 0.03
CLN6-205ENST00000564846 RPUSD4Q96CM3 377 aaKnown RBP15.24■□□□□ 0.03
CLN6-205ENST00000564846 C20orf24Q9BUV8 137 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 ZFHX3Q15911 3703 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 ITPR3Q14573 2671 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 C7orf77A4D0Y5 90 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 DNASE2O00115 360 aaPredicted RBP15.24■□□□□ 0.03
CLN6-205ENST00000564846 PYYP10082 97 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 Q6ZS46 218 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 NOL4LQ96MY1 436 aaPredicted RBP15.24■□□□□ 0.03
CLN6-205ENST00000564846 RPS10P5Q9NQ39 176 aa15.24■□□□□ 0.03
CLN6-205ENST00000564846 CLEC3BP05452 202 aa15.23■□□□□ 0.03
CLN6-205ENST00000564846 NPPCP23582 126 aa15.23■□□□□ 0.03
CLN6-205ENST00000564846 GPR183P32249 361 aa15.23■□□□□ 0.03
CLN6-205ENST00000564846 ZNF674Q2M3X9 581 aa15.23■□□□□ 0.03
CLN6-205ENST00000564846 FXYD5Q96DB9 178 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms