RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SDHCQ99643 169 aaPredicted RBP13.56□□□□□ -0.24
CLN6-204ENST00000564752 RARRES2Q99969 163 aa13.56□□□□□ -0.24
CLN6-204ENST00000564752 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
CLN6-204ENST00000564752 RD3LP0DJH9 198 aa13.55□□□□□ -0.24
CLN6-204ENST00000564752 DEFB131AP59861 70 aa13.55□□□□□ -0.24
CLN6-204ENST00000564752 RAB11AP62491 216 aa13.55□□□□□ -0.24
CLN6-204ENST00000564752 USF2Q15853 346 aaPredicted RBP13.55□□□□□ -0.24
CLN6-204ENST00000564752 FAM24BQ8N5W8 94 aa13.55□□□□□ -0.24
CLN6-204ENST00000564752 CIB3Q96Q77 187 aaPredicted RBP13.55□□□□□ -0.24
CLN6-204ENST00000564752 C7orf50Q9BRJ6 194 aaKnown RBP13.55□□□□□ -0.24
CLN6-204ENST00000564752 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
CLN6-204ENST00000564752 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 HELTA6NFD8 242 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 ZFP92A6NM28 416 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 IL7P13232 177 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 GPX4P36969 197 aaPredicted RBP13.54□□□□□ -0.24
CLN6-204ENST00000564752 GGNBP1Q5YKI7 109 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 LEMD1Q68G75 181 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 FLVCR2Q9UPI3 526 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 U3KQE9 123 aa13.54□□□□□ -0.24
CLN6-204ENST00000564752 K7EQG2 157 aa13.53□□□□□ -0.24
CLN6-204ENST00000564752 PSG1P11464 419 aa13.53□□□□□ -0.24
CLN6-204ENST00000564752 OR51G1Q8NGK1 321 aa13.53□□□□□ -0.24
CLN6-204ENST00000564752 OR11H2Q8NH07 326 aa13.53□□□□□ -0.24
CLN6-204ENST00000564752 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
CLN6-204ENST00000564752 WRBO00258 174 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 SYNGR2O43760 224 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 ADAP1O75689 374 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 OR4E1P0C645 316 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 BTCP35070 178 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 RPP30P78346 268 aaKnown RBP13.52□□□□□ -0.25
CLN6-204ENST00000564752 DHRS2Q13268 280 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 GAMTQ14353 236 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 C16orf54Q6UWD8 224 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 GLMPQ8WWB7 406 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 RNF125Q96EQ8 232 aa13.52□□□□□ -0.25
CLN6-204ENST00000564752 C11orf68Q9H3H3 251 aaKnown RBP13.52□□□□□ -0.25
CLN6-204ENST00000564752 VPS13DQ5THJ4 4388 aa13.51□□□□□ -0.25
CLN6-204ENST00000564752 FABP1P07148 127 aa13.51□□□□□ -0.25
CLN6-204ENST00000564752 ZNF688P0C7X2 276 aa13.51□□□□□ -0.25
CLN6-204ENST00000564752 ANXA7P20073 488 aaKnown RBP13.51□□□□□ -0.25
CLN6-204ENST00000564752 NUP62P37198 522 aaPredicted RBP13.51□□□□□ -0.25
CLN6-204ENST00000564752 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
CLN6-204ENST00000564752 STHQ8IWL8 128 aa13.51□□□□□ -0.25
CLN6-204ENST00000564752 DCANP1Q8TF63 244 aa13.51□□□□□ -0.25
CLN6-204ENST00000564752 PBDC1Q9BVG4 233 aa13.51□□□□□ -0.25
CLN6-204ENST00000564752 CA1P00915 261 aaPredicted RBP13.5□□□□□ -0.25
CLN6-204ENST00000564752 IFNA21P01568 189 aa13.5□□□□□ -0.25
CLN6-204ENST00000564752 NANOS2P60321 138 aaKnown RBP13.5□□□□□ -0.25
CLN6-204ENST00000564752 LGALS9CQ6DKI2 356 aa13.5□□□□□ -0.25
CLN6-204ENST00000564752 RPP25LQ8N5L8 163 aaKnown RBP13.5□□□□□ -0.25
CLN6-204ENST00000564752 C11orf45Q8TAV5 145 aa13.5□□□□□ -0.25
CLN6-204ENST00000564752 MFFQ9GZY8 342 aa13.5□□□□□ -0.25
CLN6-204ENST00000564752 PFDN2Q9UHV9 154 aa13.5□□□□□ -0.25
CLN6-204ENST00000564752 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
CLN6-204ENST00000564752 H3BP45 60 aa13.49□□□□□ -0.25
CLN6-204ENST00000564752 BUB3O43684 328 aa13.49□□□□□ -0.25
CLN6-204ENST00000564752 ZNF90Q03938 601 aa13.49□□□□□ -0.25
CLN6-204ENST00000564752 SPANXN5Q5MJ07 72 aa13.49□□□□□ -0.25
CLN6-204ENST00000564752 OR8G2PQ6IF36 304 aa13.49□□□□□ -0.25
CLN6-204ENST00000564752 SIGLEC15Q6ZMC9 328 aa13.49□□□□□ -0.25
CLN6-204ENST00000564752 LYZP61626 148 aa13.48□□□□□ -0.25
CLN6-204ENST00000564752 CNPY1Q3B7I2 92 aa13.48□□□□□ -0.25
CLN6-204ENST00000564752 TRGV9Q99603 122 aa13.48□□□□□ -0.25
CLN6-204ENST00000564752 C20orf85Q9H1P6 137 aa13.48□□□□□ -0.25
CLN6-204ENST00000564752 STRAPQ9Y3F4 350 aaKnown RBP13.48□□□□□ -0.25
CLN6-204ENST00000564752 LYRM1O43325 122 aa13.47□□□□□ -0.25
CLN6-204ENST00000564752 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
CLN6-204ENST00000564752 POLR2GP62487 172 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLN6-204ENST00000564752 OR2F1Q13607 317 aa13.47□□□□□ -0.25
CLN6-204ENST00000564752 PSMG4Q5JS54 123 aa13.47□□□□□ -0.25
CLN6-204ENST00000564752 NRN1Q9NPD7 142 aa13.47□□□□□ -0.25
CLN6-204ENST00000564752 FBXL17Q9UF56 701 aa13.47□□□□□ -0.25
CLN6-204ENST00000564752 DNAH6Q9C0G6 4158 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 KNCNA6PVL3 124 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 SNRPGP15A8MWD9 76 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 PRSS46E5RG02 174 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 DEFB4AO15263 64 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 PLA2G10O15496 165 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 DEDDO75618 318 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 GIG44P09565 113 aaPredicted RBP13.46□□□□□ -0.25
CLN6-204ENST00000564752 SNRPD3P62318 126 aaKnown RBP13.46□□□□□ -0.25
CLN6-204ENST00000564752 ID3Q02535 119 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 AKR1C1Q04828 323 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 TRPT1Q86TN4 253 aaKnown RBP13.46□□□□□ -0.25
CLN6-204ENST00000564752 THAP8Q8NA92 274 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 OR4D5Q8NGN0 318 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 PPP1R14BQ96C90 147 aa13.46□□□□□ -0.25
CLN6-204ENST00000564752 AGRNO00468 2067 aa13.45□□□□□ -0.26
CLN6-204ENST00000564752 IGKV1OR2-108A0A075B7D4 117 aa13.45□□□□□ -0.26
CLN6-204ENST00000564752 SSSCA1O60232 199 aa13.45□□□□□ -0.26
CLN6-204ENST00000564752 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
CLN6-204ENST00000564752 ACOT7LQ6ZUV0 252 aa13.45□□□□□ -0.26
CLN6-204ENST00000564752 CCDC32Q9BV29 185 aa13.45□□□□□ -0.26
CLN6-204ENST00000564752 PSENENQ9NZ42 101 aa13.45□□□□□ -0.26
CLN6-204ENST00000564752 SCGB1D2O95969 90 aa13.44□□□□□ -0.26
CLN6-204ENST00000564752 SPP1P10451 314 aa13.44□□□□□ -0.26
CLN6-204ENST00000564752 IAH1Q2TAA2 248 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms