RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 SPTBN4Q9H254 2564 aa5.8□□□□□ -1.48
HERPUD1-209ENST00000564678 LOC105371242A0A075B767 164 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 IGHV3-72A0A0B4J1Y9 119 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 PPP5D1E7EU14 171 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 PRYO14603 147 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BKO60814 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 TYMSP04818 313 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BJP06899 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 SOD3P08294 240 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 SMIM6P0DI80 62 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BOP23527 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 PRTN3P24158 256 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BBP33778 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BDP58876 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BCP62807 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST2H2BEQ16778 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 C10orf55Q5SWW7 151 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 SIGLEC15Q6ZMC9 328 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 OR2T10Q8NGZ9 312 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 C22orf15Q8WYQ4 148 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BHQ93079 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 ACY3Q96HD9 319 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BNQ99877 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 HIST1H2BMQ99879 126 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 SSBP3Q9BWW4 388 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 SCO2A0A1W2PP80 73 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 VCYO14598 125 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 PHOX2AO14813 284 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 GATA2P23769 480 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 TNXAQ16473 311 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 TPTE2P1Q5T6R2 138 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 KIR3DL3Q8N743 410 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 STXBP6Q8NFX7 210 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 ZNF503Q96F45 646 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 SFRP2Q96HF1 295 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 TRGV9Q99603 122 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 DERL1Q9BUN8 251 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 TPSG1Q9NRR2 321 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 ONECUT1Q9UBC0 465 aa5.79□□□□□ -1.48
HERPUD1-209ENST00000564678 IGF2RP11717 2491 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 IGKV1D-37A0A075B6S9 117 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 TRAV9-1A0A075B6T8 112 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 MDFIC2A0A1B0GVS7 189 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 OOSP1A8MZH6 123 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 OR7C2O60412 319 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 TRGC1P0CF51 173 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 COX7A1P24310 79 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 GPR6P46095 362 aaPredicted RBP5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 NDUFA6P56556 154 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 ARF6P62330 175 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 LY6DQ14210 128 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 C10orf113Q5VZT2 155 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 OR1L6Q8NGR2 347 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 FRZBQ92765 325 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 ATG101Q9BSB4 218 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 F11RQ9Y624 299 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 TPRP12270 2363 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 PLXNB1O43157 2135 aa5.78□□□□□ -1.48
HERPUD1-209ENST00000564678 TRBV20OR9-2A0A075B6H5 130 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 A6NNC1 897 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 ODF3BA8MYP8 253 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 COX7A2P2O60397 106 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 PLP1P60201 277 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 S100A12P80511 92 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 NPBQ8NG41 125 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 FAM167A-AS1Q96KT0 104 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 PITPNC1Q9UKF7 332 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 A0A1W2PPQ1 181 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 TMEM89A2RUT3 159 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 NDUFA3O95167 84 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 GATA3P23771 443 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 CNTFRP26992 372 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 TAS2R60P59551 318 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 MINOS1Q5TGZ0 78 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 NECAP1Q8NC96 275 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 OR5T1Q8NG75 326 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 OR10G8Q8NGN5 311 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 OR4X1Q8NH49 305 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 SRSF12Q8WXF0 261 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 SPAG8Q99932 426 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 SLC25A2Q9BXI2 301 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 TNFRSF19Q9NS68 423 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 GAR1Q9NY12 217 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 MINOS1-NBL1R4GNA1 71 aa5.77□□□□□ -1.49
HERPUD1-209ENST00000564678 COL6A6A6NMZ7 2263 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 HSBP1L1C9JCN9 74 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 TIMM23O14925 209 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 LY6HO94772 140 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 MOSP00540 346 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 OR10J4P0C629 311 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 CRYBB3P26998 211 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 GNG4P50150 75 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 DLX1P56177 255 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 ZNF90Q03938 601 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 PLGLAQ15195 96 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 HCP5Q6MZN7 132 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 PATE2Q6UY27 113 aa5.76□□□□□ -1.49
HERPUD1-209ENST00000564678 OR5AU1Q8NGC0 362 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms