RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 RCHY1Q96PM5 261 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 VSIRQ9H7M9 311 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 UBQLN2Q9UHD9 624 aa7.43□□□□□ -1.22
CDH1-206ENST00000564676 RBMY1BA6NDE4 496 aaKnown RBP7.42□□□□□ -1.22
CDH1-206ENST00000564676 RBMY1EA6NEQ0 496 aaKnown RBP7.42□□□□□ -1.22
CDH1-206ENST00000564676 DNASE2O00115 360 aaPredicted RBP7.42□□□□□ -1.22
CDH1-206ENST00000564676 IL4P05112 153 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 IL5P05113 134 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 FABP1P07148 127 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 HNRNPCP07910 306 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDH1-206ENST00000564676 RBMY1DP0C7P1 496 aaKnown RBP7.42□□□□□ -1.22
CDH1-206ENST00000564676 PSG1P11464 419 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 CRYBB3P26998 211 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 DEFA1P59665 94 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 DEFA3P59666 94 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 FAM90A2PQ658T7 463 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 LILRB2Q8N423 598 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 SMIM8Q96KF7 97 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 RAB40CQ96S21 281 aa7.42□□□□□ -1.22
CDH1-206ENST00000564676 GPN1Q9HCN4 374 aaPredicted RBP7.42□□□□□ -1.22
CDH1-206ENST00000564676 LOC102724200A0A096LPH7 203 aaPredicted RBP7.41□□□□□ -1.22
CDH1-206ENST00000564676 L7N2F9 121 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 P2RY1P47900 373 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 CMC4P56277 68 aaPredicted RBP7.41□□□□□ -1.22
CDH1-206ENST00000564676 VAMP2P63027 116 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 ZNF90Q03938 601 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 AKR1C1Q04828 323 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 OR2F1Q13607 317 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 USF2Q15853 346 aaPredicted RBP7.41□□□□□ -1.22
CDH1-206ENST00000564676 OR8G2PQ6IF36 304 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 GSG1LQ6UXU4 331 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 NRARPQ7Z6K4 114 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 OR51G1Q8NGK1 321 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 C2orf50Q96LR7 162 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 WWC2-AS2Q96NR7 200 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 TRGV9Q99603 122 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 PBDC1Q9BVG4 233 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 RABAC1Q9UI14 185 aa7.41□□□□□ -1.22
CDH1-206ENST00000564676 RCL1Q9Y2P8 373 aaKnown RBP7.41□□□□□ -1.22
CDH1-206ENST00000564676 LSM5Q9Y4Y9 91 aaKnown RBP7.41□□□□□ -1.22
CDH1-206ENST00000564676 IGKV1D-37A0A075B6S9 117 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 SMCO3A2RU48 225 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 SNRPGP15A8MWD9 76 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 INMT-MINDY4F8WBC2 141 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 MBPP02686 304 aaPredicted RBP7.4□□□□□ -1.22
CDH1-206ENST00000564676 METTL15P1P0C7V9 234 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 EIF2B2P49770 351 aaKnown RBP7.4□□□□□ -1.22
CDH1-206ENST00000564676 PAX9P55771 341 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 TAS2R30P59541 319 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 LYZP61626 148 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 ODF3L2Q3SX64 289 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 LINC00322Q6ZN03 302 aaPredicted RBP7.4□□□□□ -1.22
CDH1-206ENST00000564676 ACOT7LQ6ZUV0 252 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 THAP8Q8NA92 274 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 STXBP6Q8NFX7 210 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 RNF125Q96EQ8 232 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 GGTLC1Q9BX51 225 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 MS4A6AQ9H2W1 248 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 PFDN2Q9UHV9 154 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 U3KQE9 123 aa7.4□□□□□ -1.22
CDH1-206ENST00000564676 HELTA6NFD8 242 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 PRSS46E5RG02 174 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 K7EPK0 472 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 PRAF2O60831 178 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 TSC22D2O75157 780 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 BCAP31P51572 246 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 AP2S1P53680 142 aaPredicted RBP7.39□□□□□ -1.23
CDH1-206ENST00000564676 RRAS2P62070 204 aaPredicted RBP7.39□□□□□ -1.23
CDH1-206ENST00000564676 C16orf54Q6UWD8 224 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 TMEM144Q7Z5S9 345 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 APRG1Q8IVJ8 170 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 OR10P1Q8NGE3 313 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 PPP1R14BQ96C90 147 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 CITED4Q96RK1 184 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 FAM110AQ9BQ89 295 aa7.39□□□□□ -1.23
CDH1-206ENST00000564676 IGKV1OR2-108A0A075B7D4 117 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 TRAV2A0A0B4J234 112 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 C7orf66A4D0T2 115 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 PMS2P5A8MQ11 134 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 BUB3O43684 328 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 CCNKO75909 580 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 CFDP00746 253 aaPredicted RBP7.38□□□□□ -1.23
CDH1-206ENST00000564676 RPL35AP18077 110 aaKnown RBP7.38□□□□□ -1.23
CDH1-206ENST00000564676 PVALBP20472 110 aaPredicted RBP7.38□□□□□ -1.23
CDH1-206ENST00000564676 NUP62P37198 522 aaPredicted RBP7.38□□□□□ -1.23
CDH1-206ENST00000564676 APOC4P55056 127 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 S100A10P60903 97 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 DLK1P80370 383 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 BPIFCQ8NFQ6 507 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 GLMPQ8WWB7 406 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 MAP6D1Q9H9H5 199 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 RETNQ9HD89 108 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 MGAT4CQ9UBM8 478 aa7.38□□□□□ -1.23
CDH1-206ENST00000564676 GOSR2O14653 212 aa7.37□□□□□ -1.23
CDH1-206ENST00000564676 GATA2P23769 480 aaPredicted RBP7.37□□□□□ -1.23
CDH1-206ENST00000564676 CAV2P51636 162 aa7.37□□□□□ -1.23
CDH1-206ENST00000564676 DEFB131AP59861 70 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms