RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 KIR2DL5BA0A0G2JPC4 375 aa13.58□□□□□ -0.24
SYNGR3-204ENST00000564642 A6NHS1 94 aa13.58□□□□□ -0.24
SYNGR3-204ENST00000564642 ZNF124Q15973 351 aa13.58□□□□□ -0.24
SYNGR3-204ENST00000564642 KIR2DL5AQ8N109 375 aa13.58□□□□□ -0.24
SYNGR3-204ENST00000564642 KIR2DL5BQ8NHK3 375 aa13.58□□□□□ -0.24
SYNGR3-204ENST00000564642 OVOL2Q9BRP0 275 aa13.58□□□□□ -0.24
SYNGR3-204ENST00000564642 STRAPQ9Y3F4 350 aaKnown RBP13.58□□□□□ -0.24
SYNGR3-204ENST00000564642 TRAV6A0A075B6T7 132 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 HELTA6NFD8 242 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 AP2S1P53680 142 aaPredicted RBP13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 DEFB131AP59861 70 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 POLR2GP62487 172 aaKnown RBP eCLIP13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 C16orf54Q6UWD8 224 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 Q6ZWC4 215 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 OR4D5Q8NGN0 318 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 MITD1Q8WV92 249 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 RNF125Q96EQ8 232 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 PSENENQ9NZ42 101 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 PFDN2Q9UHV9 154 aa13.57□□□□□ -0.24
SYNGR3-204ENST00000564642 H3BP45 60 aa13.56□□□□□ -0.24
SYNGR3-204ENST00000564642 K7EQG2 157 aa13.56□□□□□ -0.24
SYNGR3-204ENST00000564642 ZNF90Q03938 601 aa13.56□□□□□ -0.24
SYNGR3-204ENST00000564642 IAH1Q2TAA2 248 aaPredicted RBP13.56□□□□□ -0.24
SYNGR3-204ENST00000564642 ZFAND6Q6FIF0 208 aa13.56□□□□□ -0.24
SYNGR3-204ENST00000564642 PBDC1Q9BVG4 233 aa13.56□□□□□ -0.24
SYNGR3-204ENST00000564642 GSKIPQ9P0R6 139 aa13.56□□□□□ -0.24
SYNGR3-204ENST00000564642 IGKV1D-37A0A075B6S9 117 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 FAM240BA0A1B0GVZ2 78 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 SNRPGP15A8MWD9 76 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 SPRY2O43597 315 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 SCGB1D2O95969 90 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 NUP62P37198 522 aaPredicted RBP13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 DEFB135Q30KP9 77 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 LEMD1Q68G75 181 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 MZT2BQ6NZ67 158 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 IL17DQ8TAD2 202 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 GLMPQ8WWB7 406 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 TRGV9Q99603 122 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 CSTL1Q9H114 145 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
SYNGR3-204ENST00000564642 BUB3O43684 328 aa13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 SSSCA1O60232 199 aa13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 LYZP61626 148 aa13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 OR2F1Q13607 317 aa13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 OR8G2PQ6IF36 304 aa13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 FAM24BQ8N5W8 94 aa13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 ZBTB8BQ8NAP8 495 aaPredicted RBP13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 SMIM8Q96KF7 97 aa13.54□□□□□ -0.24
SYNGR3-204ENST00000564642 PRSS46E5RG02 174 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 H2AFB2P0C5Z0 115 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 AKR1C1Q04828 323 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 ZNF846Q147U1 533 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 SIGLEC15Q6ZMC9 328 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 STHQ8IWL8 128 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 THAP8Q8NA92 274 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 DCANP1Q8TF63 244 aa13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 WDR12Q9GZL7 423 aaKnown RBP13.53□□□□□ -0.24
SYNGR3-204ENST00000564642 ZNF688P0C7X2 276 aa13.52□□□□□ -0.25
SYNGR3-204ENST00000564642 ZNF431Q8TF32 576 aaPredicted RBP13.52□□□□□ -0.25
SYNGR3-204ENST00000564642 PPP1R14BQ96C90 147 aa13.52□□□□□ -0.25
SYNGR3-204ENST00000564642 RNF183Q96D59 192 aa13.52□□□□□ -0.25
SYNGR3-204ENST00000564642 RAB40CQ96S21 281 aa13.52□□□□□ -0.25
SYNGR3-204ENST00000564642 SEC22CQ9BRL7 303 aa13.52□□□□□ -0.25
SYNGR3-204ENST00000564642 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
SYNGR3-204ENST00000564642 IGKV1OR2-108A0A075B7D4 117 aa13.51□□□□□ -0.25
SYNGR3-204ENST00000564642 CFDP00746 253 aaPredicted RBP13.51□□□□□ -0.25
SYNGR3-204ENST00000564642 ACOT7LQ6ZUV0 252 aa13.51□□□□□ -0.25
SYNGR3-204ENST00000564642 NRN1Q9NPD7 142 aa13.51□□□□□ -0.25
SYNGR3-204ENST00000564642 TBC1D24Q9ULP9 559 aa13.51□□□□□ -0.25
SYNGR3-204ENST00000564642 SMCO3A2RU48 225 aa13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 C5orf51A6NDU8 294 aa13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 FAM25EA8MYX2 175 aa13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 CCSO14618 274 aa13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 PAX9P55771 341 aa13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 ASAH1Q13510 395 aa13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 C12orf45Q8N5I9 185 aaPredicted RBP13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 FBXL17Q9UF56 701 aa13.5□□□□□ -0.25
SYNGR3-204ENST00000564642 UPK1BO75841 260 aa13.49□□□□□ -0.25
SYNGR3-204ENST00000564642 TAS2R30P59541 319 aa13.49□□□□□ -0.25
SYNGR3-204ENST00000564642 C1orf194Q5T5A4 169 aa13.49□□□□□ -0.25
SYNGR3-204ENST00000564642 TMEM144Q7Z5S9 345 aa13.49□□□□□ -0.25
SYNGR3-204ENST00000564642 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
SYNGR3-204ENST00000564642 OR10P1Q8NGE3 313 aa13.49□□□□□ -0.25
SYNGR3-204ENST00000564642 PMS2P5A8MQ11 134 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 L7N2F9 121 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 TSC22D2O75157 780 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 CA1P00915 261 aaPredicted RBP13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 MBPP02686 304 aaPredicted RBP13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 METTL15P1P0C7V9 234 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 VAMP2P63027 116 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 PSMG4Q5JS54 123 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 TMEM14EPQ6UXP3 125 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 ENKURQ8TC29 256 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 GATAD1Q8WUU5 269 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 SEPSECSQ9HD40 501 aaKnown RBP13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 BATF3Q9NR55 127 aa13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 RCL1Q9Y2P8 373 aaKnown RBP13.48□□□□□ -0.25
SYNGR3-204ENST00000564642 A0A0J9YWU9 116 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms