RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 UBE2MP61081 183 aaKnown RBP14.65□□□□□ -0.06
SHCBP1-203ENST00000564272 HELTA6NFD8 242 aa14.64□□□□□ -0.07
SHCBP1-203ENST00000564272 ZFP92A6NM28 416 aa14.64□□□□□ -0.07
SHCBP1-203ENST00000564272 MED6O75586 246 aa14.64□□□□□ -0.07
SHCBP1-203ENST00000564272 ZNF90Q03938 601 aa14.64□□□□□ -0.07
SHCBP1-203ENST00000564272 DHRS2Q13268 280 aa14.64□□□□□ -0.07
SHCBP1-203ENST00000564272 RNF125Q96EQ8 232 aa14.64□□□□□ -0.07
SHCBP1-203ENST00000564272 AGRNO00468 2067 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 CXorf65A6NEN9 183 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 KNCNA6PVL3 124 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 SYNGR2O43760 224 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 ADAP1O75689 374 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 IL7P13232 177 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 EIF2B2P49770 351 aaKnown RBP14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 RAB11AP62491 216 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 STHQ8IWL8 128 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 GATAD1Q8WUU5 269 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 PBDC1Q9BVG4 233 aa14.63□□□□□ -0.07
SHCBP1-203ENST00000564272 WRBO00258 174 aa14.62□□□□□ -0.07
SHCBP1-203ENST00000564272 BUB3O43684 328 aa14.62□□□□□ -0.07
SHCBP1-203ENST00000564272 JTBO76095 146 aa14.62□□□□□ -0.07
SHCBP1-203ENST00000564272 CIB3Q96Q77 187 aaPredicted RBP14.62□□□□□ -0.07
SHCBP1-203ENST00000564272 RARRES2Q99969 163 aa14.62□□□□□ -0.07
SHCBP1-203ENST00000564272 H3BP45 60 aa14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 OR4E1P0C645 316 aa14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 ANXA7P20073 488 aaKnown RBP14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 LYZP61626 148 aa14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 OR2F1Q13607 317 aa14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 PSMG4Q5JS54 123 aa14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 SIGLEC15Q6ZMC9 328 aa14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 TRPT1Q86TN4 253 aaKnown RBP14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 OR11H2Q8NH07 326 aa14.61□□□□□ -0.07
SHCBP1-203ENST00000564272 IGKV1OR2-108A0A075B7D4 117 aa14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 CENPXA8MT69 81 aa14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 PRSS46E5RG02 174 aa14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 AP2S1P53680 142 aaPredicted RBP14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 ACTL10Q5JWF8 245 aa14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 SPANXN5Q5MJ07 72 aa14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 COQ8AQ8NI60 647 aa14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 C7orf50Q9BRJ6 194 aaKnown RBP14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 NRN1Q9NPD7 142 aa14.6□□□□□ -0.07
SHCBP1-203ENST00000564272 GIG44P09565 113 aaPredicted RBP14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 ATF4P18848 351 aaPredicted RBP14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 C4BPBP20851 252 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 RPP30P78346 268 aaKnown RBP14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 C4orf46Q504U0 113 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 OR8G2PQ6IF36 304 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 TMEM217Q8N7C4 229 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 TRGV9Q99603 122 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 NDUFA13Q9P0J0 144 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 ALMS1Q8TCU4 4167 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 DNAH1Q9P2D7 4330 aa14.59□□□□□ -0.07
SHCBP1-203ENST00000564272 FABP1P07148 127 aa14.58□□□□□ -0.08
SHCBP1-203ENST00000564272 NUP62P37198 522 aaPredicted RBP14.58□□□□□ -0.08
SHCBP1-203ENST00000564272 POLR2GP62487 172 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHCBP1-203ENST00000564272 PLECQ15149 4684 aaKnown RBP14.58□□□□□ -0.08
SHCBP1-203ENST00000564272 THAP8Q8NA92 274 aa14.58□□□□□ -0.08
SHCBP1-203ENST00000564272 NUPR2A6NF83 97 aa14.57□□□□□ -0.08
SHCBP1-203ENST00000564272 PLA2G10O15496 165 aa14.57□□□□□ -0.08
SHCBP1-203ENST00000564272 ID3Q02535 119 aa14.57□□□□□ -0.08
SHCBP1-203ENST00000564272 OR4D5Q8NGN0 318 aa14.57□□□□□ -0.08
SHCBP1-203ENST00000564272 RAB40CQ96S21 281 aa14.57□□□□□ -0.08
SHCBP1-203ENST00000564272 STRAPQ9Y3F4 350 aaKnown RBP14.57□□□□□ -0.08
SHCBP1-203ENST00000564272 HYDINQ4G0P3 5121 aa14.57□□□□□ -0.08
SHCBP1-203ENST00000564272 DEFB4AO15263 64 aa14.56□□□□□ -0.08
SHCBP1-203ENST00000564272 SSSCA1O60232 199 aa14.56□□□□□ -0.08
SHCBP1-203ENST00000564272 IFNA21P01568 189 aa14.56□□□□□ -0.08
SHCBP1-203ENST00000564272 SPP1P10451 314 aa14.56□□□□□ -0.08
SHCBP1-203ENST00000564272 SNRPD3P62318 126 aaKnown RBP14.56□□□□□ -0.08
SHCBP1-203ENST00000564272 ACOT7LQ6ZUV0 252 aa14.56□□□□□ -0.08
SHCBP1-203ENST00000564272 C11orf68Q9H3H3 251 aaKnown RBP14.56□□□□□ -0.08
SHCBP1-203ENST00000564272 SNRPGP15A8MWD9 76 aa14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 NKX2-1P43699 371 aaPredicted RBP14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 AKR1C1Q04828 323 aa14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 MORN3Q6PF18 240 aaPredicted RBP14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 CEMP1Q6PRD7 247 aaPredicted RBP14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 GSG1LQ6UXU4 331 aa14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 PPP1R14BQ96C90 147 aa14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 C20orf85Q9H1P6 137 aa14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 PFDN2Q9UHV9 154 aa14.55□□□□□ -0.08
SHCBP1-203ENST00000564272 LYRM1O43325 122 aa14.54□□□□□ -0.08
SHCBP1-203ENST00000564272 SCGB1D2O95969 90 aa14.54□□□□□ -0.08
SHCBP1-203ENST00000564272 WDR12Q9GZL7 423 aaKnown RBP14.54□□□□□ -0.08
SHCBP1-203ENST00000564272 SEPSECSQ9HD40 501 aaKnown RBP14.54□□□□□ -0.08
SHCBP1-203ENST00000564272 CLEC5AQ9NY25 188 aa14.54□□□□□ -0.08
SHCBP1-203ENST00000564272 PSENENQ9NZ42 101 aa14.54□□□□□ -0.08
SHCBP1-203ENST00000564272 CCNKO75909 580 aa14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 GATA2P23769 480 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 NANOS2P60321 138 aaKnown RBP14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 IAH1Q2TAA2 248 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 TMEM41BQ5BJD5 291 aa14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 C1orf194Q5T5A4 169 aa14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 TMEM182Q6ZP80 229 aaPredicted RBP14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 MITD1Q8WV92 249 aa14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 FBXL17Q9UF56 701 aa14.53□□□□□ -0.08
SHCBP1-203ENST00000564272 SMCO3A2RU48 225 aa14.52□□□□□ -0.09
SHCBP1-203ENST00000564272 DEFB1P60022 68 aa14.52□□□□□ -0.09
SHCBP1-203ENST00000564272 ZBTB8BQ8NAP8 495 aaPredicted RBP14.52□□□□□ -0.09
SHCBP1-203ENST00000564272 Q8NAQ8 132 aa14.52□□□□□ -0.09
SHCBP1-203ENST00000564272 PHLDA1Q8WV24 401 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms