RNA–Protein interactions for RNA: ENST00000563428.5

TAF1C-208, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 2

Gene TAF1C, Length 2,531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-208	ENST00000563428	DIRC3	C9JPN6	131 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	LINC00614	P0C842	121 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	RNASE2	P10153	161 aa	Known RBP	13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	REL	Q04864	619 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	RAB31	Q13636	194 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	WDR73	Q6P4I2	378 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	OSR1	Q8TAX0	266 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	ZNF596	Q8TC21	504 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	RNF2	Q99496	336 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	NRN1	Q9NPD7	142 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	NAT8B	Q9UHF3	227 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	PRND	Q9UKY0	176 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	CELSR1	Q9NYQ6	3014 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	IGHV3-48	P01763	117 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	MT-ND6	P03923	174 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	GPR6	P46095	362 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	BATF	Q16520	125 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	OR10J3	Q5JRS4	329 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	OR4C13	Q8NGP0	309 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	CLEC7A	Q9BXN2	247 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428	OSTC	Q9NRP0	149 aa		13.23	□□□□□ -0.29
TAF1C-208	ENST00000563428		A0A1W2PS18	150 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	LIPF	P07098	398 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	TCL1A	P56279	114 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	KIAA1644	Q3SXP7	199 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	C10orf55	Q5SWW7	151 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	RCHY1	Q96PM5	261 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	TPSG1	Q9NRR2	321 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	WASHC3	Q9Y3C0	194 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	SLC25A17	O43808	307 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	OR7C2	O60412	319 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	FSTL3	O95633	263 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	IGLV1-47	P01700	117 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	KLRD1	Q13241	179 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	C8orf31	Q8N9H6	132 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	KCNS1	Q96KK3	526 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	TMEM167B	Q9NRX6	74 aa		13.22	□□□□□ -0.29
TAF1C-208	ENST00000563428	BUB1B-PAK6	H3BSN5	160 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	IGLV2-8	P01709	118 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	PRRX1	P54821	245 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	TMEM177	Q53S58	311 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	NHLRC2	Q8NBF2	726 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	LINC00479	Q96M42	142 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	BET1L	Q9NYM9	111 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	LOC105371242	A0A075B767	164 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	FNDC10	F2Z333	226 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	CNTFR	P26992	372 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	AMT	P48728	403 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	COX19	Q49B96	90 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	PDPN	Q86YL7	162 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	ZNF257	Q9Y2Q1	563 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	INSIG2	Q9Y5U4	225 aa		13.21	□□□□□ -0.29
TAF1C-208	ENST00000563428	BMPR1B	O00238	502 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	OR5G3	P0C626	314 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	TFPI2	P48307	235 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	ZNF137P	P52743	207 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	RPL8	P62917	257 aa	Known RBP	13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	SUMO1	P63165	101 aa	Known RBP	13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	COL5A1-AS1	Q5SY13	56 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	COMMD5	Q9GZQ3	224 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	ISLR	O14498	428 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	ZNF253	O75346	499 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	CA1	P00915	261 aa	Predicted RBP	13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	ZFP36	P26651	326 aa	Known RBP	13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	RPL19	P84098	196 aa	Known RBP	13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	SPATA45	Q537H7	98 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	C2orf83	Q53S99	150 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	LDLRAD2	Q5SZI1	272 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	RUSC1-AS1	Q66K80	236 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	C8orf46	Q8TAG6	207 aa		13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	TECR	Q9NZ01	308 aa	Known RBP	13.2	□□□□□ -0.3
TAF1C-208	ENST00000563428	CGB1	A6NKQ9	187 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	IGLV2-23	P01705	113 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	APELA	P0DMC3	54 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	TIGIT	Q495A1	244 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	LHFPL4	Q7Z7J7	247 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	NIT1	Q86X76	327 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	LY6G5B	Q8NDX9	201 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	RPE	Q96AT9	228 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	FAM167A-AS1	Q96KT0	104 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	SLC25A2	Q9BXI2	301 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	MRPL36	Q9P0J6	103 aa	Known RBP	13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	HILPDA	Q9Y5L2	63 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	ABCA1	O95477	2261 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	IGHV1-3	A0A0C4DH29	117 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	SMIM27	A0A1W2PRY6	76 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	PSMB11	A5LHX3	300 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	AMY1A	P04745	511 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	REG1A	P05451	166 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	PMCH	P20382	165 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	SRI	P30626	198 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	CD69	Q07108	199 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	FAM71F2	Q6NXP2	309 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	FAM168A	Q92567	244 aa		13.19	□□□□□ -0.3
TAF1C-208	ENST00000563428	ZNF324	O75467	553 aa	Predicted RBP	13.18	□□□□□ -0.3
TAF1C-208	ENST00000563428	EFNA4	P52798	201 aa		13.18	□□□□□ -0.3
TAF1C-208	ENST00000563428	MMD	Q15546	238 aa		13.18	□□□□□ -0.3
TAF1C-208	ENST00000563428	IGF2BP2-AS1	Q96M15	143 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms