RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ZNF726P1Q15940 193 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 SPATA46Q5T0L3 261 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 LOC101059948A0A1B0GTJ6 334 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 TCRBV4S1A1TA0A5B7 111 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 CT55Q8WUE5 264 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 KIF26AQ9ULI4 1882 aaPredicted RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 COL16A1Q07092 1604 aaPredicted RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 RLFQ13129 1914 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 DEPPQ9NTK1 212 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 CACNA1IQ9P0X4 2223 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 OBSL1O75147 1896 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 MAFAQ8NHW3 353 aaPredicted RBP5.19□□□□□ -1.58
CLK3-212ENST00000563418 GLMPQ8WWB7 406 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 SPATA12Q7Z6I5 190 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 TEX45Q8NA69 505 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 ELSPBP1Q96BH3 223 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 SELENOKQ9Y6D0 94 aa5.19□□□□□ -1.58
CLK3-212ENST00000563418 CRXO43186 299 aaPredicted RBP5.18□□□□□ -1.58
CLK3-212ENST00000563418 SPEM2Q0P670 501 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 GPHA2Q96T91 129 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 IGKV1D-8A0A087WSZ0 117 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 IGKV1D-13A0A0B4J2D9 117 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 IGKV1-13P0DP09 117 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 TIMM23O14925 209 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 KLK15Q9H2R5 256 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 DUX4L9Q6RFH8 374 aaPredicted RBP5.18□□□□□ -1.58
CLK3-212ENST00000563418 KIAA0100Q14667 2235 aaKnown RBP5.18□□□□□ -1.58
CLK3-212ENST00000563418 K7ERJ3 54 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 NDUFB3O43676 98 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 SMIM10L1P0DMW3 83 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 DEFB133Q30KQ1 61 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 SMIM10Q96HG1 83 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 MED12LQ86YW9 2145 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
CLK3-212ENST00000563418 LYPD1Q8N2G4 141 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 DIDO1Q9BTC0 2240 aaKnown RBP5.18□□□□□ -1.58
CLK3-212ENST00000563418 IGKV1-9A0A0C4DH69 117 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 KNCNA6PVL3 124 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 LYZL6O75951 148 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 K7EMI3 77 aa5.18□□□□□ -1.58
CLK3-212ENST00000563418 FOXA2Q9Y261 457 aaPredicted RBP5.18□□□□□ -1.58
CLK3-212ENST00000563418 Q6Q795 121 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 PSG4Q00888 419 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 SH2D6Q7Z4S9 175 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 ZNF747Q9BV97 191 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 FAM236AA0A1B0GUQ0 79 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 FAM236BA0A1B0GV22 79 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 ITGBL1O95965 494 aaPredicted RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 MPV17P39210 176 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 OR13A1Q8NGR1 328 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 IMUPQ9GZP8 106 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 IGHV3-20A0A0C4DH32 117 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 NDUFA7O95182 113 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 RSPO2Q6UXX9 243 aaPredicted RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 Q71RC1 249 aaPredicted RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 TRAV24A0A0B4J272 114 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 RPL27AP46776 148 aaKnown RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 ZNF497Q6ZNH5 498 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 HIST1H4AP62805 103 aaKnown RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 C19orf54Q5BKX5 351 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 FAM90A1Q86YD7 464 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 PILRAQ9UKJ1 303 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 PLXND1Q9Y4D7 1925 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 C17orf98A8MV24 154 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 MAP1BP46821 2468 aaKnown RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 TRAV13-1A0A0B4J241 112 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 HRKO00198 91 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 ZIC3O60481 467 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 CSRP1P21291 193 aaKnown RBP5.17□□□□□ -1.58
CLK3-212ENST00000563418 SYNJ2BPP57105 145 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 PRCDQ00LT1 54 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 TMEM52Q8NDY8 209 aa5.17□□□□□ -1.58
CLK3-212ENST00000563418 UNC13CQ8NB66 2214 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 A0A087WV48 116 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 CENPVL3A0A0U1RRI6 287 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 LAMTOR5O43504 91 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 TCRAP04437 139 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 TNFAIP6P98066 277 aaPredicted RBP5.16□□□□□ -1.58
CLK3-212ENST00000563418 ZNF441Q8N8Z8 693 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 DYNLRB2Q8TF09 96 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 NPFFO15130 113 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 IGKV1-5P01602 117 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 RBMY1FQ15415 496 aaKnown RBP5.16□□□□□ -1.58
CLK3-212ENST00000563418 LCNL1Q6ZST4 164 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 LMO1P25800 156 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 ID1P41134 155 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 EBLN2Q6P2I7 272 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 ZNF329Q86UD4 541 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 C20orf173Q96LM9 149 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 AMTNQ6UX39 209 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 MGAMO43451 1857 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 LDLRAD1Q5T700 205 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 MYO7BQ6PIF6 2116 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 WFDC2Q14508 124 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 TMEM75Q8N9X5 138 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 PEMTQ9UBM1 199 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms