RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 CLVS1Q8IUQ0 354 aaPredicted RBP15.08■□□□□ 0
CHD9-208ENST00000563410 OR51G1Q8NGK1 321 aa15.08■□□□□ 0
CHD9-208ENST00000563410 DIRAS2Q96HU8 199 aa15.08■□□□□ 0
CHD9-208ENST00000563410 XCL2Q9UBD3 114 aa15.08■□□□□ 0
CHD9-208ENST00000563410 HSPB7Q9UBY9 170 aa15.08■□□□□ 0
CHD9-208ENST00000563410 CACFD1Q9UGQ2 172 aa15.08■□□□□ 0
CHD9-208ENST00000563410 GSTZ1O43708 216 aaPredicted RBP15.07■□□□□ 0
CHD9-208ENST00000563410 IFNA10P01566 189 aa15.07■□□□□ 0
CHD9-208ENST00000563410 SUPT4H1P63272 117 aaKnown RBP15.07■□□□□ 0
CHD9-208ENST00000563410 ZNF767PQ75MW2 155 aa15.07■□□□□ 0
CHD9-208ENST00000563410 GPR141Q7Z602 305 aa15.07■□□□□ 0
CHD9-208ENST00000563410 RNF126Q9BV68 326 aa15.07■□□□□ 0
CHD9-208ENST00000563410 C1QTNF4Q9BXJ3 329 aa15.07■□□□□ 0
CHD9-208ENST00000563410 MRPS26Q9BYN8 205 aaKnown RBP15.07■□□□□ 0
CHD9-208ENST00000563410 KCNIP3Q9Y2W7 256 aa15.07■□□□□ 0
CHD9-208ENST00000563410 U3KQ87 197 aa15.07■□□□□ 0
CHD9-208ENST00000563410 HLA-DRB4P13762 266 aa15.06■□□□□ 0
CHD9-208ENST00000563410 NUTF2P61970 127 aaKnown RBP15.06■□□□□ 0
CHD9-208ENST00000563410 LYZL2Q7Z4W2 148 aa15.06■□□□□ 0
CHD9-208ENST00000563410 DTD1Q8TEA8 209 aa15.06■□□□□ 0
CHD9-208ENST00000563410 RNF125Q96EQ8 232 aa15.06■□□□□ 0
CHD9-208ENST00000563410 RBKSQ9H477 322 aa15.06■□□□□ 0
CHD9-208ENST00000563410 HLA-DRB4X5D2U9 266 aa15.06■□□□□ 0
CHD9-208ENST00000563410 IGKV1D-37A0A075B6S9 117 aa15.05■□□□□ -0
CHD9-208ENST00000563410 A0A0B4J2A0 478 aa15.05■□□□□ -0
CHD9-208ENST00000563410 NKX2-1P43699 371 aaPredicted RBP15.05■□□□□ -0
CHD9-208ENST00000563410 CCR6P51684 374 aa15.05■□□□□ -0
CHD9-208ENST00000563410 DEFB1P60022 68 aa15.05■□□□□ -0
CHD9-208ENST00000563410 SMCO1Q147U7 214 aa15.05■□□□□ -0
CHD9-208ENST00000563410 GDF5OSQ5U4N7 250 aa15.05■□□□□ -0
CHD9-208ENST00000563410 LGI3Q8N145 548 aa15.05■□□□□ -0
CHD9-208ENST00000563410 CENPSQ8N2Z9 138 aa15.05■□□□□ -0
CHD9-208ENST00000563410 DYNC2LI1Q8TCX1 351 aa15.05■□□□□ -0
CHD9-208ENST00000563410 SCRT1Q9BWW7 348 aa15.05■□□□□ -0
CHD9-208ENST00000563410 RABL2AQ9UBK7 228 aaPredicted RBP15.05■□□□□ -0
CHD9-208ENST00000563410 SHPKQ9UHJ6 478 aa15.05■□□□□ -0
CHD9-208ENST00000563410 RABL2BQ9UNT1 228 aa15.05■□□□□ -0
CHD9-208ENST00000563410 DEFB131BA0A096LNP1 70 aa15.04■□□□□ -0
CHD9-208ENST00000563410 AMBPP02760 352 aa15.04■□□□□ -0
CHD9-208ENST00000563410 KLF9Q13886 244 aaPredicted RBP15.04■□□□□ -0
CHD9-208ENST00000563410 ZNF705AQ6ZN79 300 aaPredicted RBP15.04■□□□□ -0
CHD9-208ENST00000563410 CCDC59Q9P031 241 aaKnown RBP15.04■□□□□ -0
CHD9-208ENST00000563410 SCP2D1Q9UJQ7 156 aa15.04■□□□□ -0
CHD9-208ENST00000563410 PKHD1P08F94 4074 aa15.04■□□□□ -0
CHD9-208ENST00000563410 AKR1C4P17516 323 aa15.03■□□□□ -0
CHD9-208ENST00000563410 ZNF90Q03938 601 aa15.03■□□□□ -0
CHD9-208ENST00000563410 GAMTQ14353 236 aa15.03■□□□□ -0
CHD9-208ENST00000563410 OR8G2PQ6IF36 304 aa15.03■□□□□ -0
CHD9-208ENST00000563410 NEU1Q99519 415 aa15.03■□□□□ -0
CHD9-208ENST00000563410 PBDC1Q9BVG4 233 aa15.03■□□□□ -0
CHD9-208ENST00000563410 WDR12Q9GZL7 423 aaKnown RBP15.03■□□□□ -0
CHD9-208ENST00000563410 SCGB3A2Q96PL1 93 aa15.02■□□□□ -0
CHD9-208ENST00000563410 SOSTQ9BQB4 213 aa15.02■□□□□ -0
CHD9-208ENST00000563410 ZFP92A6NM28 416 aa15.01□□□□□ -0.01
CHD9-208ENST00000563410 ZNF705FA8MVS1 300 aaPredicted RBP15.01□□□□□ -0.01
CHD9-208ENST00000563410 SOCS3O14543 225 aa15.01□□□□□ -0.01
CHD9-208ENST00000563410 ZNF705DP0CH99 300 aaPredicted RBP15.01□□□□□ -0.01
CHD9-208ENST00000563410 ZNF705BP0CI00 300 aaPredicted RBP15.01□□□□□ -0.01
CHD9-208ENST00000563410 GPX4P36969 197 aaPredicted RBP15.01□□□□□ -0.01
CHD9-208ENST00000563410 NUP62P37198 522 aaPredicted RBP15.01□□□□□ -0.01
CHD9-208ENST00000563410 SAV1Q9H4B6 383 aaPredicted RBP15.01□□□□□ -0.01
CHD9-208ENST00000563410 MCUBQ9NWR8 336 aa15.01□□□□□ -0.01
CHD9-208ENST00000563410 IGKV3-20P01619 116 aa15□□□□□ -0.01
CHD9-208ENST00000563410 ATP5IP56385 69 aaPredicted RBP15□□□□□ -0.01
CHD9-208ENST00000563410 FXYD7P58549 80 aa15□□□□□ -0.01
CHD9-208ENST00000563410 GSG1LQ6UXU4 331 aa15□□□□□ -0.01
CHD9-208ENST00000563410 RAB2BQ8WUD1 216 aa15□□□□□ -0.01
CHD9-208ENST00000563410 RSL24D1Q9UHA3 163 aaKnown RBP15□□□□□ -0.01
CHD9-208ENST00000563410 PITX3O75364 302 aa14.99□□□□□ -0.01
CHD9-208ENST00000563410 FOXI2Q6ZQN5 318 aa14.99□□□□□ -0.01
CHD9-208ENST00000563410 ZNF709Q8N972 641 aa14.99□□□□□ -0.01
CHD9-208ENST00000563410 OR1S1Q8NH92 325 aa14.99□□□□□ -0.01
CHD9-208ENST00000563410 SLC35E1Q96K37 410 aa14.99□□□□□ -0.01
CHD9-208ENST00000563410 LINC00052Q96N35 136 aa14.99□□□□□ -0.01
CHD9-208ENST00000563410 SLIRPQ9GZT3 109 aaKnown RBP14.99□□□□□ -0.01
CHD9-208ENST00000563410 PCLOQ9Y6V0 5065 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 ANXA3P12429 323 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 TNFSF8P32971 234 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 PSMB3P49720 205 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 TMBIM6P55061 237 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 LYZP61626 148 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 SRPXP78539 464 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 C1orf194Q5T5A4 169 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 LINC00336Q6ZUF6 198 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 POM121L12Q8N7R1 296 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 CLUHP3Q96NS8 147 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 BCL7BQ9BQE9 202 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 NDUFAF3Q9BU61 184 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 PFDN2Q9UHV9 154 aa14.98□□□□□ -0.01
CHD9-208ENST00000563410 IGKV1OR2-108A0A075B7D4 117 aa14.97□□□□□ -0.01
CHD9-208ENST00000563410 SMIM9A6NGZ8 99 aa14.97□□□□□ -0.01
CHD9-208ENST00000563410 ID1P41134 155 aa14.97□□□□□ -0.01
CHD9-208ENST00000563410 ZNF79Q15937 498 aa14.97□□□□□ -0.01
CHD9-208ENST00000563410 TRGV9Q99603 122 aa14.97□□□□□ -0.01
CHD9-208ENST00000563410 PKD1P98161 4303 aa14.96□□□□□ -0.01
CHD9-208ENST00000563410 IGHV3OR16-12A0A075B7B8 117 aa14.96□□□□□ -0.01
CHD9-208ENST00000563410 A0A1B0GVY2 172 aa14.96□□□□□ -0.01
CHD9-208ENST00000563410 TMEM189A5PLL7 270 aa14.96□□□□□ -0.01
CHD9-208ENST00000563410 SNRPGP15A8MWD9 76 aa14.96□□□□□ -0.01
CHD9-208ENST00000563410 SPART-AS1P0CW21 52 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 203.1 ms