RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
USB1-208ENST00000563207 TMEM213A2RRL7 107 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 FAM24AA6NFZ4 105 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 ZFP92A6NM28 416 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 H0YIZ8 118 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 C3orf84H3BNL1 204 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 TOMM40O96008 361 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 CFDP00746 253 aaPredicted RBP11.81□□□□□ -0.52
USB1-208ENST00000563207 CBLN1P23435 193 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 AKR1C1Q04828 323 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 BAXQ07812 192 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 ATP6V1FQ16864 119 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 TIGITQ495A1 244 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 OR2K2Q8NGT1 345 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 THAP6Q8TBB0 222 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 TM2D3Q9BRN9 247 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 RNF126Q9BV68 326 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 OR5AC2Q9NZP5 309 aa11.81□□□□□ -0.52
USB1-208ENST00000563207 PUS1Q9Y606 427 aaKnown RBP eCLIP11.81□□□□□ -0.52
USB1-208ENST00000563207 TRAV14DV4A0A0A6YYC5 116 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 RD3LP0DJH9 198 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 LYL1P12980 280 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 FOLR2P14207 255 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 BMI1P35226 326 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 SLC38A11Q08AI6 406 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 WDR89Q96FK6 387 aaPredicted RBP11.8□□□□□ -0.52
USB1-208ENST00000563207 ZNF414Q96IQ9 312 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 CSMD3Q7Z407 3707 aa11.8□□□□□ -0.52
USB1-208ENST00000563207 STARD9Q9P2P6 4700 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 IGKV1D-37A0A075B6S9 117 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 IGSF23A1L1A6 192 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 CCNKO75909 580 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 CST7O76096 145 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 ARL16Q0P5N6 197 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 ZFAND6Q6FIF0 208 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 TEPPQ6URK8 271 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 OR51G1Q8NGK1 321 aa11.79□□□□□ -0.52
USB1-208ENST00000563207 IGKV1OR2-108A0A075B7D4 117 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 SMCO3A2RU48 225 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 PSG1P11464 419 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 SELENOTP62341 195 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 Q6ZNX1 250 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 LILRB2Q8N423 598 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 DYNLRB2Q8TF09 96 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 METTL26Q96S19 204 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 ZMAT4Q9H898 229 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 MBD2Q9UBB5 411 aa11.78□□□□□ -0.52
USB1-208ENST00000563207 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 A0A1W2PS18 150 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 CD5P06127 495 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 NPPCP23582 126 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.53
USB1-208ENST00000563207 RAB31Q13636 194 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 HAGHQ16775 308 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 VWC2Q2TAL6 325 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 DEFB114Q30KQ6 69 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 LCN12Q6JVE5 192 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 TMEM217Q8N7C4 229 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 NARS2Q96I59 477 aaKnown RBP11.77□□□□□ -0.53
USB1-208ENST00000563207 TMEM231Q9H6L2 316 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 RETNQ9HD89 108 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 PFDN2Q9UHV9 154 aa11.77□□□□□ -0.53
USB1-208ENST00000563207 TRAV25A0A0B4J276 109 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 A8MZ25 164 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 IL4P05112 153 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 CRYBB3P26998 211 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 RPL12P30050 165 aaKnown RBP11.76□□□□□ -0.53
USB1-208ENST00000563207 S100A7P31151 101 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 NHLH2Q02577 135 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 ZNF90Q03938 601 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 BPIFCQ8NFQ6 507 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 CITED4Q96RK1 184 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 TMEM147Q9BVK8 224 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 WFDC10AQ9H1F0 79 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 EDA2RQ9HAV5 297 aa11.76□□□□□ -0.53
USB1-208ENST00000563207 IGHV3OR16-8A0A075B7F1 116 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 MPDU1O75352 247 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 NUP62P37198 522 aaPredicted RBP11.75□□□□□ -0.53
USB1-208ENST00000563207 CD300EQ496F6 205 aaPredicted RBP11.75□□□□□ -0.53
USB1-208ENST00000563207 LAMTOR1Q6IAA8 161 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 CYP2G1PQ6ZSU1 146 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 OR5C1Q8NGR4 320 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 OR2T35Q8NGX2 323 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 RNF125Q96EQ8 232 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 RHPN1-AS1Q9BWJ2 59 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 RABAC1Q9UI14 185 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 SLC45A2Q9UMX9 530 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 HSPB11Q9Y547 144 aa11.75□□□□□ -0.53
USB1-208ENST00000563207 ZNF785A8K8V0 405 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 CHEK1O14757 476 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 ZNF207O43670 478 aaKnown RBP11.74□□□□□ -0.53
USB1-208ENST00000563207 HNRNPCP07910 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
USB1-208ENST00000563207 CD7P09564 240 aa11.74□□□□□ -0.53
USB1-208ENST00000563207 PXDC1Q5TGL8 231 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms