RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 Q6Q795 121 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 LINC00575Q6W349 94 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 LINC00322Q6ZN03 302 aaPredicted RBP0.23□□□□□ -2.37
CHD9-207ENST00000562806 ST6GALNAC3Q8NDV1 305 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 TMEM254Q8TBM7 123 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 WFDC5Q8TCV5 224 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 ADAT3Q96EY9 351 aaPredicted RBP0.23□□□□□ -2.37
CHD9-207ENST00000562806 ARL5BQ96KC2 179 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 CCDC42Q96M95 316 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 GPER1Q99527 375 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 LINC00467Q9BRT7 94 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 TRIM4Q9C037 500 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.23□□□□□ -2.37
CHD9-207ENST00000562806 UBAP1Q9NZ09 502 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 FBXO5Q9UKT4 447 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 E9PCH4 1651 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 EML5Q05BV3 1969 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 TNRC6AQ8NDV7 1962 aaKnown RBP0.23□□□□□ -2.37
CHD9-207ENST00000562806 TNS3Q68CZ2 1445 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 RTL1A6NKG5 1358 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 IGLV3-32A0A0A0MS00 114 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 TCRBV4S1A1TA0A5B7 111 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 PDE6DO43924 150 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 NUPR1O60356 82 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 NIPSNAP2O75323 286 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 SMIM17P0DL12 118 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 SRP14P37108 136 aaKnown RBP0.22□□□□□ -2.37
CHD9-207ENST00000562806 DYNLT1P63172 113 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 EIF5AP63241 154 aaKnown RBP0.22□□□□□ -2.37
CHD9-207ENST00000562806 LYRM7Q5U5X0 104 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 C2orf82Q6UX34 121 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 SLC25A40Q8TBP6 338 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 SLAMF6Q96DU3 332 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 PRRT1Q99946 306 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 PRADC1Q9BSG0 188 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 TMEM133Q9H2Q1 129 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 UQCC1Q9NVA1 299 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 C14orf105Q9NVL8 296 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 ORMDL1Q9P0S3 153 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 CHCHD2Q9Y6H1 151 aaPredicted RBP0.22□□□□□ -2.37
CHD9-207ENST00000562806 MCM3APO60318 1980 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 DOCK5Q9H7D0 1870 aa0.22□□□□□ -2.37
CHD9-207ENST00000562806 COL1A1P02452 1464 aaPredicted RBP0.22□□□□□ -2.37
CHD9-207ENST00000562806 PIK3C2GO75747 1445 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 NCOA1Q15788 1441 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 ADCY9O60503 1353 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 ZNF106Q9H2Y7 1883 aaKnown RBP0.21□□□□□ -2.38
CHD9-207ENST00000562806 TRGV10A0A0A0MS01 117 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 IGHV1-58A0A0C4DH39 117 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 TLCD2A6NGC4 264 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 GADD45GO95257 159 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 PRH1P02810 166 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 RPS17P08708 135 aaKnown RBP0.21□□□□□ -2.38
CHD9-207ENST00000562806 RANP62826 216 aaKnown RBP0.21□□□□□ -2.38
CHD9-207ENST00000562806 SPRNQ5BIV9 151 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 TMEM97Q5BJF2 176 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 SLC30A7Q8NEW0 376 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 OR8J2Q8NGG1 315 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 OR51A2Q8NGJ7 313 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 OR2T35Q8NGX2 323 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 YPEL2Q96QA6 119 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 TP53RKQ96S44 253 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 SMR3AQ99954 134 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 RNASE7Q9H1E1 156 aaKnown RBP0.21□□□□□ -2.38
CHD9-207ENST00000562806 TLNRD1Q9H1K6 362 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 PARVGQ9HBI0 331 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 GLTPQ9NZD2 209 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 PLAC8Q9NZF1 115 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 TNFSF18Q9UNG2 199 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 PRELID3BQ9Y3B1 194 aa0.21□□□□□ -2.38
CHD9-207ENST00000562806 SMIM9A6NGZ8 99 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 OR2T8A6NH00 312 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 TIMM17BO60830 172 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 LYPLA2O95372 231 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 HAND1O96004 215 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 IGLV3-1P01715 115 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 RNASE4P34096 147 aaKnown RBP0.2□□□□□ -2.38
CHD9-207ENST00000562806 AESQ08117 197 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 KRR1Q13601 381 aaKnown RBP0.2□□□□□ -2.38
CHD9-207ENST00000562806 RGS21Q2M5E4 152 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 SPINK9Q5DT21 86 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 C4orf22Q6V702 233 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 Q8IYB0 196 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 OR52L1Q8NGH7 329 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 LINC00052Q96N35 136 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 PARVBQ9HBI1 364 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 TAS2R7Q9NYW3 318 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 IDI2-AS1Q9NZ38 188 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 CEP192Q8TEP8 1941 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 SBF1O95248 1867 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 FMN1Q68DA7 1419 aa0.2□□□□□ -2.38
CHD9-207ENST00000562806 ZFC3H1O60293 1989 aaKnown RBP0.19□□□□□ -2.38
CHD9-207ENST00000562806 PLB1Q6P1J6 1458 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 A8MWV9 139 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 KLF7O75840 302 aaPredicted RBP0.19□□□□□ -2.38
CHD9-207ENST00000562806 TCRBP04435 133 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 SRIP30626 198 aa0.19□□□□□ -2.38
CHD9-207ENST00000562806 LSM6P62312 80 aaKnown RBP0.19□□□□□ -2.38
CHD9-207ENST00000562806 ITGB3BPQ13352 177 aaPredicted RBP0.19□□□□□ -2.38
CHD9-207ENST00000562806 BCL2L15Q5TBC7 163 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms