RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 UBE2E2Q96LR5 201 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 P2RX4Q99571 388 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 SRSF8Q9BRL6 282 aaKnown RBP3.43□□□□□ -1.86
SMG1-206ENST00000562668 GON7Q9BXV9 100 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 KRTAP4-3Q9BYR4 195 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 COA4Q9NYJ1 87 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 SHPKQ9UHJ6 478 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 ZNF257Q9Y2Q1 563 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 OR51B2Q9Y5P1 312 aa3.43□□□□□ -1.86
SMG1-206ENST00000562668 TSSC4Q9Y5U2 329 aaPredicted RBP3.43□□□□□ -1.86
SMG1-206ENST00000562668 PRKDCP78527 4128 aaKnown RBP3.42□□□□□ -1.86
SMG1-206ENST00000562668 TRAV6A0A075B6T7 132 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 DUXBA0A1W2PPF3 345 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 TCRBV4S1A1TA0A5B7 111 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 CENPXA8MT69 81 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 MPTX1A8MV57 137 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 ST8SIA3O43173 380 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 CREBL2O60519 120 aaPredicted RBP3.42□□□□□ -1.86
SMG1-206ENST00000562668 ADAP1O75689 374 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 CNIH1O95406 144 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 PRH1P02810 166 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 IL5P05113 134 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 REG1AP05451 166 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 TRAPPC2P0DI81 140 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 TRAPPC2BP0DI82 140 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 SLC25A6P12236 298 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 S100GP29377 79 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 INPP1P49441 399 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 SLC35B1P78383 322 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 TMEM267Q0VDI3 215 aaPredicted RBP3.42□□□□□ -1.86
SMG1-206ENST00000562668 PNRC1Q12796 327 aaPredicted RBP3.42□□□□□ -1.86
SMG1-206ENST00000562668 IL15RAQ13261 267 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 TRIM16LQ309B1 348 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 KRTAP13-3Q3SY46 172 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 THOC7Q6I9Y2 204 aaKnown RBP3.42□□□□□ -1.86
SMG1-206ENST00000562668 H2BFWTQ7Z2G1 175 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 LYG2Q86SG7 212 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 ZNF695Q8IW36 515 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 FAM219AQ8IW50 185 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 LGI3Q8N145 548 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 WFDC9Q8NEX5 89 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 OR4X2Q8NGF9 303 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 OR5B3Q8NH48 314 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 OR52E5Q8NH55 327 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 C4orf3Q8WVX3 66 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 MS4A10Q96PG2 267 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 TSC22D3Q99576 134 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 SPIN2AQ99865 258 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 SPIN2BQ9BPZ2 258 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 SEC22CQ9BRL7 303 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 MARVELD1Q9BSK0 173 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 COMMD5Q9GZQ3 224 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 NUDT15Q9NV35 164 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 PRNDQ9UKY0 176 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 KCNIP3Q9Y2W7 256 aa3.42□□□□□ -1.86
SMG1-206ENST00000562668 HUWE1Q7Z6Z7 4374 aaKnown RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 C7orf66A4D0T2 115 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 MFSD2BA6NFX1 497 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 I3L2K1 104 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 K7EIM0 57 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 SNAPC5O75971 98 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 TRBV12-3P01733 135 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 HLA-AP01891 365 aaKnown RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 LGALS1P09382 135 aaKnown RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 OR13C7P0DN81 318 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 RNASE2P10153 161 aaKnown RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 ANXA3P12429 323 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 AKR1C2P52895 323 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 ERVK-16P61578 105 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 SRPXP78539 464 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 SMCO1Q147U7 214 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 DEFB136Q30KP8 78 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 NSUN5P1Q3KNT7 163 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 SPINK9Q5DT21 86 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 MZT2BQ6NZ67 158 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 ZNF343Q6P1L6 599 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 HSD17B13Q7Z5P4 300 aaPredicted RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 LINC00612Q8N6U2 182 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 OR4D5Q8NGN0 318 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 OR1L8Q8NGR8 309 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 OR4A16Q8NH70 328 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 ZNF431Q8TF32 576 aaPredicted RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 OR10C1Q96KK4 312 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 PHB2Q99623 299 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 C11orf1Q9H5F2 150 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 PALMDQ9NP74 551 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 FKBP11Q9NYL4 201 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 MRPL36Q9P0J6 103 aaKnown RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 TMED3Q9Y3Q3 217 aa3.41□□□□□ -1.86
SMG1-206ENST00000562668 F11RQ9Y624 299 aaKnown RBP3.41□□□□□ -1.86
SMG1-206ENST00000562668 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.4□□□□□ -1.87
SMG1-206ENST00000562668 FAM223BA6NKX1 122 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 PRSS46E5RG02 174 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 INMT-MINDY4F8WBC2 141 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 OR2J3O76001 311 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 ATG12O94817 140 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 TMEM50AO95807 157 aa3.4□□□□□ -1.87
SMG1-206ENST00000562668 PTTG1O95997 202 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms