RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 GPX7Q96SL4 187 aaPredicted RBP3.97□□□□□ -1.77
TCF4-215ENST00000562638 CHCHD5Q9BSY4 110 aa3.97□□□□□ -1.77
TCF4-215ENST00000562638 SHANK2-AS3Q9BTD1 123 aa3.97□□□□□ -1.77
TCF4-215ENST00000562638 CHAC1Q9BUX1 264 aa3.97□□□□□ -1.77
TCF4-215ENST00000562638 LIME1Q9H400 295 aa3.97□□□□□ -1.77
TCF4-215ENST00000562638 TAS2R4Q9NYW5 299 aa3.97□□□□□ -1.77
TCF4-215ENST00000562638 KIAA1549Q9HCM3 1950 aa3.96□□□□□ -1.77
TCF4-215ENST00000562638 COL16A1Q07092 1604 aaPredicted RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 TNS1Q9HBL0 1735 aaKnown RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 A0A0J9YW62 118 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 SH2D7A6NKC9 451 aaPredicted RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 A8MWV9 139 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 SSSCA1O60232 199 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 SRSF10O75494 262 aaKnown RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 ZFAND5O76080 213 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 C1orf105O95561 183 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 PLAUP00749 431 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 RENP00797 406 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 CRYGSP22914 178 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 LEPP41159 167 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 TNP2Q05952 138 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 LOXL1Q08397 574 aaPredicted RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 GTF3C1Q12789 2109 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 TESK1Q15569 626 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 DEFB121Q5J5C9 76 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 GDF5OSQ5U4N7 250 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 LYRM7Q5U5X0 104 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 IGFL2Q6UWQ7 119 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 SLC25A48Q6ZT89 311 aaKnown RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 Q71RC1 249 aaPredicted RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 RNF44Q7L0R7 432 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 AAED1Q7RTV5 226 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 C11orf53Q8IXP5 236 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 RND1Q92730 232 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 TAF15Q92804 592 aaKnown RBP eCLIP3.96□□□□□ -1.78
TCF4-215ENST00000562638 Q96MF0 132 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 UPK3BQ9BT76 320 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 ZNF747Q9BV97 191 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 AGPAT4-IT1Q9H0P7 198 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 C20orf141Q9NUB4 165 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 NHP2Q9NX24 153 aaKnown RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 ALKBH4Q9NXW9 302 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 TMEM14AQ9Y6G1 99 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 POLR2AP24928 1970 aaKnown RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 MDC1Q14676 2089 aaKnown RBP3.96□□□□□ -1.78
TCF4-215ENST00000562638 DOCK9Q9BZ29 2069 aa3.96□□□□□ -1.78
TCF4-215ENST00000562638 TRBV7-3A0A075B6L6 115 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 A0A1B0GTH9 108 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 C5orf63A6NC05 138 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 C17orf51A8MQB3 221 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 NDUFB2O95178 105 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 TRACP01848 142 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 IGHG2P01859 326 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 BGLAPP02818 100 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 EFNA4P52798 201 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 HILS1P60008 231 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 ADIGQ0VDE8 80 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 CDSNQ15517 529 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 AMN1Q8IY45 258 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 OR5AS1Q8N127 324 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 SLC22A24Q8N4F4 322 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 PFN4Q8NHR9 129 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 KLK6Q92876 244 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 BMFQ96LC9 184 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 IL36RNQ9UBH0 155 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 LHFPL6Q9Y693 200 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 DOCK3Q8IZD9 2030 aa3.95□□□□□ -1.78
TCF4-215ENST00000562638 EML5Q05BV3 1969 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 COL4A3Q01955 1670 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 TRAV2A0A0B4J234 112 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 PIGBOS1A0A0B4J2F0 54 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 SCO2A0A1W2PP80 73 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 C19orf71A6NCJ1 209 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 LINC01548A6NM66 108 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 PLPP1O14494 284 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 CDX4O14627 284 aaPredicted RBP3.94□□□□□ -1.78
TCF4-215ENST00000562638 CHEK1O14757 476 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 TIMM23O14925 209 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 SPINT2O43291 252 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 IGKCP01834 107 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 P04436 131 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 ELANEP08246 267 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 FKBP2P26885 142 aaKnown RBP3.94□□□□□ -1.78
TCF4-215ENST00000562638 GCHFRP30047 84 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 IZUMO4Q1ZYL8 232 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 FAM182BQ5T319 152 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 DGAT2L7PQ6IED9 249 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 MFSD12Q6NUT3 480 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 SDIM1Q6ZPB5 146 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 DGAT2L6Q6ZPD8 337 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 MARCH3Q86UD3 253 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 FAM90A1Q86YD7 464 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 PCP2Q8IVA1 136 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 RAB42Q8N4Z0 105 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 LINC00311Q8N616 119 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 NEXN-AS1Q8NBZ9 246 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 ZMAT4Q9H898 229 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 SLC25A22Q9H936 323 aa3.94□□□□□ -1.78
TCF4-215ENST00000562638 HEYLQ9NQ87 328 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms