RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 ABHD1Q96SE0 405 aa12.8□□□□□ -0.36
KATNB1-202ENST00000562542 PBDC1Q9BVG4 233 aa12.8□□□□□ -0.36
KATNB1-202ENST00000562542 PGPEP1Q9NXJ5 209 aa12.8□□□□□ -0.36
KATNB1-202ENST00000562542 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
KATNB1-202ENST00000562542 BLOC1S6Q9UL45 172 aa12.8□□□□□ -0.36
KATNB1-202ENST00000562542 ANAPC10Q9UM13 185 aa12.8□□□□□ -0.36
KATNB1-202ENST00000562542 EREGO14944 169 aa12.79□□□□□ -0.36
KATNB1-202ENST00000562542 ATG12O94817 140 aa12.79□□□□□ -0.36
KATNB1-202ENST00000562542 TOMM40O96008 361 aa12.79□□□□□ -0.36
KATNB1-202ENST00000562542 PSMB9P28065 219 aa12.79□□□□□ -0.36
KATNB1-202ENST00000562542 NUP62P37198 522 aaPredicted RBP12.79□□□□□ -0.36
KATNB1-202ENST00000562542 RNASE11Q8TAA1 199 aaKnown RBP12.79□□□□□ -0.36
KATNB1-202ENST00000562542 MDFICQ9P1T7 246 aa12.79□□□□□ -0.36
KATNB1-202ENST00000562542 A0A1W2PPQ1 181 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 HTR2BP41595 481 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 PAX9P55771 341 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 BSXQ3C1V8 233 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 NPIPB3Q92617 1050 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 S100A16Q96FQ6 103 aaKnown RBP12.78□□□□□ -0.36
KATNB1-202ENST00000562542 ACY3Q96HD9 319 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 ZNF586Q9NXT0 402 aa12.78□□□□□ -0.36
KATNB1-202ENST00000562542 A0A0J9YX75 114 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 CBY3A6NI87 242 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 INSP01308 110 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 SMR3BP02814 79 aaPredicted RBP12.77□□□□□ -0.37
KATNB1-202ENST00000562542 P0C879 139 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 PGAM2P15259 253 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 NAT1P18440 290 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 RNF125Q96EQ8 232 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
KATNB1-202ENST00000562542 RPRMQ9NS64 109 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 DOK5Q9P104 306 aa12.77□□□□□ -0.37
KATNB1-202ENST00000562542 PSG1P11464 419 aa12.76□□□□□ -0.37
KATNB1-202ENST00000562542 TRIM16LQ309B1 348 aa12.76□□□□□ -0.37
KATNB1-202ENST00000562542 ETFRF1Q6IPR1 90 aa12.76□□□□□ -0.37
KATNB1-202ENST00000562542 LYSMD2Q8IV50 215 aa12.76□□□□□ -0.37
KATNB1-202ENST00000562542 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
KATNB1-202ENST00000562542 RRNAD1Q96FB5 475 aaKnown RBP12.76□□□□□ -0.37
KATNB1-202ENST00000562542 EBAG9O00559 213 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 ISLRO14498 428 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 SOCS3O14543 225 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 IFNA5P01569 189 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 LINC00315P59091 139 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 SPINK13Q1W4C9 94 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 CDPF1Q6NVV7 123 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 VPS13BQ7Z7G8 4022 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 GNPNAT1Q96EK6 184 aaPredicted RBP12.75□□□□□ -0.37
KATNB1-202ENST00000562542 TP53RKQ96S44 253 aa12.75□□□□□ -0.37
KATNB1-202ENST00000562542 FAM229AH3BQW9 127 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 M0R2Z0 102 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 TSPOP30536 169 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 PRSS3P35030 304 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 UCP3P55916 312 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 SPCS3P61009 180 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 OR5I1Q13606 314 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 FCGR1BQ92637 280 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 CNBD2Q96M20 576 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 C17orf77Q96MU5 243 aa12.74□□□□□ -0.37
KATNB1-202ENST00000562542 PI3P19957 117 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 AZU1P20160 251 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 ERVFC1-1P60608 527 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 B2MP61769 119 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 C2orf83Q53S99 150 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 OR8G2PQ6IF36 304 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 SPARTQ8N0X7 666 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 UPK3BQ9BT76 320 aa12.73□□□□□ -0.37
KATNB1-202ENST00000562542 TRAV26-1A0A087WT03 109 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 LOC100506127A0A0U1RQW1 187 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 PLAC8L1A1L4L8 177 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 NXPH3O95157 252 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 PIGPP57054 158 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 SUPT4H1P63272 117 aaKnown RBP12.72□□□□□ -0.37
KATNB1-202ENST00000562542 ICAM4Q14773 271 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 SAMD13Q5VXD3 122 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 Q6ZSN1 163 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 BAP18Q8IXM2 172 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 C20orf173Q96LM9 149 aa12.72□□□□□ -0.37
KATNB1-202ENST00000562542 A0A0G2JRQ6 117 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 A0A0J9YY99 117 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 C3orf85A0A1B0GTC6 90 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 CEBPZOSA8MTT3 80 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 HTN1P15515 57 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 RCVRNP35243 200 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 KRTAP10-1P60331 282 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 RND3P61587 244 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 ESRGQ1W209 222 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 SP6Q3SY56 376 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 C1orf194Q5T5A4 169 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 LINC01587Q99440 93 aa12.71□□□□□ -0.37
KATNB1-202ENST00000562542 MRPS16Q9Y3D3 137 aaKnown RBP12.71□□□□□ -0.37
KATNB1-202ENST00000562542 UBR4Q5T4S7 5183 aa12.71□□□□□ -0.38
KATNB1-202ENST00000562542 M6PRP20645 277 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms