RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PEA15Q15121 130 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 GUK1Q16774 197 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 OR51G1Q8NGK1 321 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 MS4A10Q96PG2 267 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 JMJD8Q96S16 334 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
COMMD4-205ENST00000562310 TECRQ9NZ01 308 aaKnown RBP11.13□□□□□ -0.63
COMMD4-205ENST00000562310 ACANP16112 2415 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 I3L521 148 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 PF4V1P10720 104 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 S100A7P31151 101 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 FGF8P55075 233 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-205ENST00000562310 DEFA5Q01523 94 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 TOR2AQ5JU69 321 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 PQLC2Q6ZP29 291 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 Q8WTZ3 238 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 SMR3AQ99954 134 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
COMMD4-205ENST00000562310 GSX1Q9H4S2 264 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-205ENST00000562310 SEPSECSQ9HD40 501 aaKnown RBP11.12□□□□□ -0.63
COMMD4-205ENST00000562310 S4R3C0 116 aa11.12□□□□□ -0.63
COMMD4-205ENST00000562310 F8P00451 2351 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 CELSR1Q9NYQ6 3014 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 RBFOX3A6NFN3 312 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 OR2T8A6NH00 312 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 KRBOX1C9JBD0 128 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 OR2C1O95371 312 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 CD5P06127 495 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 RNASE1P07998 156 aaKnown RBP11.11□□□□□ -0.63
COMMD4-205ENST00000562310 C8orf88P0DMB2 117 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 BCL2P10415 239 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 GPR183P32249 361 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 LYZP61626 148 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 CCL20P78556 96 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 TMEM95Q3KNT9 176 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 ZNF600Q6ZNG1 722 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 OR1B1Q8NGR6 318 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 CCDC140Q96MF4 163 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 TREM1Q9NP99 234 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 DOK5Q9P104 306 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 RNF24Q9Y225 148 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 HIGD1AQ9Y241 93 aa11.11□□□□□ -0.63
COMMD4-205ENST00000562310 LOC102723971A0A1B0GUV8 181 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 WI2-2373I1.2A0A1W2PRP0 233 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 ANKRD34BA5PLL1 514 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 HMGB3O15347 200 aaKnown RBP11.1□□□□□ -0.63
COMMD4-205ENST00000562310 TGOLN2O43493 480 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 NDUFS6O75380 124 aaKnown RBP11.1□□□□□ -0.63
COMMD4-205ENST00000562310 IGHV3-23P01764 117 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 ELANEP08246 267 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 CTSGP08311 255 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 ARL14EPLP0DKL9 152 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 ORM2P19652 201 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 ZP3P21754 424 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 PSMB8P28062 276 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 HILS1P60008 231 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 RELQ04864 619 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-205ENST00000562310 FOXE3Q13461 319 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 SPATA31B1PQ5VZV4 182 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 TEX38Q6PEX7 206 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 MIR17HGQ75NE6 70 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 IQCF2Q8IXL9 164 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 STXBP6Q8NFX7 210 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 RNF125Q96EQ8 232 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 NARS2Q96I59 477 aaKnown RBP11.1□□□□□ -0.63
COMMD4-205ENST00000562310 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 TMEM167BQ9NRX6 74 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 SONP18583 2426 aaKnown RBP11.1□□□□□ -0.63
COMMD4-205ENST00000562310 AKAP9Q99996 3911 aa11.1□□□□□ -0.63
COMMD4-205ENST00000562310 CRYBA1P05813 215 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 GCHFRP30047 84 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 RAB9AP51151 201 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 HAGHQ16775 308 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 CLEC19AQ6UXS0 136 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 PATE2Q6UY27 113 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 LINC00305Q7Z4B0 112 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 SCRT1Q9BWW7 348 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 ESM1Q9NQ30 184 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 VAX2Q9UIW0 290 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 HIVEP2P31629 2446 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 CSMD1Q96PZ7 3565 aa11.09□□□□□ -0.63
COMMD4-205ENST00000562310 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
COMMD4-205ENST00000562310 FAM181BA6NEQ2 426 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 OR7C2O60412 319 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
COMMD4-205ENST00000562310 IL4P05112 153 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 CLEC3BP05452 202 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 ADMP35318 185 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 ZNF491Q8N8L2 437 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 RNF152Q8N8N0 203 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 CHRDL1Q9BU40 450 aa11.08□□□□□ -0.64
COMMD4-205ENST00000562310 MRPL27Q9P0M9 148 aaKnown RBP11.08□□□□□ -0.64
COMMD4-205ENST00000562310 OTOGQ6ZRI0 2925 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms