RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 SULT1A3P0DMM9 295 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 SULT1A4P0DMN0 295 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 HLA-DRB4P13762 266 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 DEFB1P60022 68 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 NUTF2P61970 127 aaKnown RBP11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 GDF5OSQ5U4N7 250 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 OR51S1Q8NGJ8 323 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 HLA-DRB4X5D2U9 266 aa11.98□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 GSTZ1O43708 216 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 SPCS2Q15005 226 aa11.97□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 ZNF705AQ6ZN79 300 aaPredicted RBP11.97□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 IL22RA2Q969J5 263 aa11.97□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 RNF125Q96EQ8 232 aa11.97□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 PRRT1Q99946 306 aa11.97□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 HSPB7Q9UBY9 170 aa11.97□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 A0A1B0GVY2 172 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 ZNF705FA8MVS1 300 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 CTDSPLO15194 276 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 IFNA10P01566 189 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 ZNF705DP0CH99 300 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 ZNF705BP0CI00 300 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 NKX2-1P43699 371 aaPredicted RBP11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 NOXA1Q86UR1 476 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 WDR12Q9GZL7 423 aaKnown RBP11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 RBKSQ9H477 322 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 CACFD1Q9UGQ2 172 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 U3KQ87 197 aa11.96□□□□□ -0.49
VPS9D1-AS1-201ENST00000562298 DYNC1H1Q14204 4646 aaKnown RBP11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 IGKV1D-37A0A075B6S9 117 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 IGKV3-20P01619 116 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SUPT4H1P63272 117 aaKnown RBP11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 ZNF90Q03938 601 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 IL18Q14116 193 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 GSG1LQ6UXU4 331 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 LYZL2Q7Z4W2 148 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 CLVS1Q8IUQ0 354 aaPredicted RBP11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 LGI3Q8N145 548 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 POM121L12Q8N7R1 296 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 DTD1Q8TEA8 209 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 NEU1Q99519 415 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 NDUFAF3Q9BU61 184 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 PBDC1Q9BVG4 233 aa11.95□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 RYR1P21817 5038 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 ANKRD20A5PA0PJZ0 165 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 P0DMU3 169 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 FAM231AP0DMU4 169 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 FAM231CP0DMU5 169 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 CCR6P51684 374 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 FXYD7P58549 80 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 KLF9Q13886 244 aaPredicted RBP11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 GAMTQ14353 236 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SMCO1Q147U7 214 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 ZNF709Q8N972 641 aa11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SAV1Q9H4B6 383 aaPredicted RBP11.94□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 A0A0B4J2A0 478 aa11.93□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 ZFP92A6NM28 416 aa11.93□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SOCS3O14543 225 aa11.93□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 DIRAS2Q96HU8 199 aa11.93□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 LINC00052Q96N35 136 aa11.93□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SHPKQ9UHJ6 478 aa11.93□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 KCNIP3Q9Y2W7 256 aa11.93□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 M0R2N4 97 aa11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 RTL8CO15255 209 aa11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SPART-AS1P0CW21 52 aa11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 AKR1C4P17516 323 aa11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 NUP62P37198 522 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 ALDH3B2P48448 385 aa11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 EMP1P54849 157 aa11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 FOXI2Q6ZQN5 318 aa11.92□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SMIM9A6NGZ8 99 aa11.91□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 GPX4P36969 197 aaPredicted RBP11.91□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 PSMB3P49720 205 aa11.91□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 GPR141Q7Z602 305 aa11.91□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SLC35B3Q9H1N7 401 aa11.91□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SCP2D1Q9UJQ7 156 aa11.91□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 TMEM189A5PLL7 270 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 LYZP61626 148 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 ZNF79Q15937 498 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 C1orf194Q5T5A4 169 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 COQ8AQ8NI60 647 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 DYNC2LI1Q8TCX1 351 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SLC35E1Q96K37 410 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 CLUHP3Q96NS8 147 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 SCGB3A2Q96PL1 93 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 MRPS26Q9BYN8 205 aaKnown RBP11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 MCUBQ9NWR8 336 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 CCDC59Q9P031 241 aaKnown RBP11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 RABL2AQ9UBK7 228 aaPredicted RBP11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 DKK2Q9UBU2 259 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 RABL2BQ9UNT1 228 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 RFNGQ9Y644 331 aa11.9□□□□□ -0.5
VPS9D1-AS1-201ENST00000562298 DNAH11Q96DT5 4516 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 IGKV1OR2-108A0A075B7D4 117 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
VPS9D1-AS1-201ENST00000562298 F6UB75 175 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms