RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MYCNOSP40205 109 aa7.76□□□□□ -1.17
SMG1-205ENST00000561947 PDLIM4P50479 330 aa7.76□□□□□ -1.17
SMG1-205ENST00000561947 ERVFC1-1P60608 527 aa7.76□□□□□ -1.17
SMG1-205ENST00000561947 RPL15P61313 204 aaKnown RBP7.76□□□□□ -1.17
SMG1-205ENST00000561947 ARPC1AQ92747 370 aa7.76□□□□□ -1.17
SMG1-205ENST00000561947 PITPNC1Q9UKF7 332 aa7.76□□□□□ -1.17
SMG1-205ENST00000561947 CDC42EP3Q9UKI2 254 aa7.76□□□□□ -1.17
SMG1-205ENST00000561947 V9GYV3 84 aa7.76□□□□□ -1.17
SMG1-205ENST00000561947 PCP4L1A6NKN8 68 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 PEX7O00628 323 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 GOSR1O95249 250 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 IGKV1-17P01599 117 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 GP9P14770 177 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 CNN1P51911 297 aaKnown RBP7.75□□□□□ -1.17
SMG1-205ENST00000561947 LYZP61626 148 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 CX3CL1P78423 397 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 ASPHD1Q5U4P2 390 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 RBM14Q96PK6 669 aaKnown RBP7.75□□□□□ -1.17
SMG1-205ENST00000561947 GAR1Q9NY12 217 aaKnown RBP7.75□□□□□ -1.17
SMG1-205ENST00000561947 TACC2O95359 2948 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 FABP1P07148 127 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 S100A2P29034 98 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 NDPQ00604 133 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 BLNKQ8WV28 456 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 AJUBAQ96IF1 538 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 GPR61Q9BZJ8 451 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 OSTCQ9NRP0 149 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 WNK2Q9Y3S1 2297 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 IGLV11-55A0A075B6I3 123 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 SNRPCP09234 159 aaKnown RBP7.75□□□□□ -1.17
SMG1-205ENST00000561947 NBEAP1P0C6P0 100 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 RD3LP0DJH9 198 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 RANP62826 216 aaKnown RBP7.75□□□□□ -1.17
SMG1-205ENST00000561947 RPEL1Q2QD12 228 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 KLF17Q5JT82 389 aaPredicted RBP7.75□□□□□ -1.17
SMG1-205ENST00000561947 TTC9CQ8N5M4 171 aa7.75□□□□□ -1.17
SMG1-205ENST00000561947 ISLRO14498 428 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 FAM106CPP0CH98 169 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 PDZD11Q5EBL8 140 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 LEMD1Q68G75 181 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 LINC00479Q96M42 142 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 FANCD2OSQ96PS1 177 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 SLC25A39Q9BZJ4 359 aaPredicted RBP7.74□□□□□ -1.17
SMG1-205ENST00000561947 RNASE7Q9H1E1 156 aaKnown RBP7.74□□□□□ -1.17
SMG1-205ENST00000561947 LPAR2Q9HBW0 351 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 MRPL27Q9P0M9 148 aaKnown RBP7.74□□□□□ -1.17
SMG1-205ENST00000561947 TRAPPC1Q9Y5R8 145 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 TOMM40O96008 361 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 SLC25A5P05141 298 aaKnown RBP7.74□□□□□ -1.17
SMG1-205ENST00000561947 MGST1P10620 155 aaKnown RBP7.74□□□□□ -1.17
SMG1-205ENST00000561947 COA6Q5JTJ3 125 aaKnown RBP7.74□□□□□ -1.17
SMG1-205ENST00000561947 FAM120AOSQ5T036 256 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 TMEM183AQ8IXX5 376 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 Q8N9W7 124 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 C1RLQ9NZP8 487 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 TMEM14CQ9P0S9 112 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 EPDR1Q9UM22 224 aa7.74□□□□□ -1.17
SMG1-205ENST00000561947 POLR3KQ9Y2Y1 108 aaPredicted RBP7.74□□□□□ -1.17
SMG1-205ENST00000561947 XKRY2A2RUG3 117 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 PGPA6NDG6 321 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 HIST1H1BP16401 226 aaKnown RBP7.73□□□□□ -1.17
SMG1-205ENST00000561947 BRS3P32247 399 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 SAA4P35542 130 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 GNG5P63218 68 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 ZNF600Q6ZNG1 722 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 ZNF48Q96MX3 618 aaPredicted RBP7.73□□□□□ -1.17
SMG1-205ENST00000561947 CCL19Q99731 98 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 TRAV30A0A087WSZ9 112 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 IGHV7-81A0A0B4J1V7 117 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 TRAV34A0A0B4J273 112 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 YPEL3P61236 119 aaPredicted RBP7.73□□□□□ -1.17
SMG1-205ENST00000561947 TMEM183BQ1AE95 376 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 IBA57Q5T440 356 aaKnown RBP7.73□□□□□ -1.17
SMG1-205ENST00000561947 NHLRC2Q8NBF2 726 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 ABCA1O95477 2261 aa7.73□□□□□ -1.17
SMG1-205ENST00000561947 NPFFO15130 113 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 HLA-DRB1P01911 266 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
SMG1-205ENST00000561947 MFAP4P55083 255 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 BAGE2Q86Y30 109 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 OR10D4PQ8NGN7 298 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 PIMREGQ9BSJ6 248 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 SHANK2-AS3Q9BTD1 123 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 Q9H3A6 140 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 H3BRN7 92 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 GNG7O60262 68 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
SMG1-205ENST00000561947 OR8I2Q8N0Y5 310 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 ZNF491Q8N8L2 437 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 C5orf17Q8NAS9 161 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 FAM168AQ92567 244 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 RNF125Q96EQ8 232 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 TMEM68Q96MH6 324 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 NIT2Q9NQR4 276 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 KLF12Q9Y4X4 402 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 S4R3C0 116 aa7.72□□□□□ -1.17
SMG1-205ENST00000561947 WI2-2373I1.2A0A1W2PRP0 233 aa7.71□□□□□ -1.17
SMG1-205ENST00000561947 H3BTX0 84 aa7.71□□□□□ -1.17
SMG1-205ENST00000561947 FABP4P15090 132 aa7.71□□□□□ -1.17
SMG1-205ENST00000561947 UBE2G1P62253 170 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms