RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 PYCARDQ9ULZ3 195 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 TECTAO75443 2155 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 DENND4CQ5VZ89 1909 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 ANAPC1Q9H1A4 1944 aa0.56□□□□□ -2.32
CHD9-204ENST00000561869 ADGRB2O60241 1585 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 IGKV2-40A0A087WW87 121 aaPredicted RBP0.55□□□□□ -2.32
CHD9-204ENST00000561869 TRAV14DV4A0A0A6YYC5 116 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 TRAV12-1A0A0B4J245 112 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 C1orf196B1AJZ1 125 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 CLDN25C9JDP6 229 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 SULT1B1O43704 296 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 LYZL6O75951 148 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 UBL3O95164 117 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 IFNA7P01567 189 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 IGKV2D-40P01614 121 aaPredicted RBP0.55□□□□□ -2.32
CHD9-204ENST00000561869 SSR2P43308 183 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 DEFA3P59666 94 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 BASP1P80723 227 aaKnown RBP0.55□□□□□ -2.32
CHD9-204ENST00000561869 KRR1Q13601 381 aaKnown RBP0.55□□□□□ -2.32
CHD9-204ENST00000561869 CDK5R1Q15078 307 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 BRMS1LQ5PSV4 323 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 HACD4Q5VWC8 232 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 C22orf39Q6P5X5 142 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 LINC00471Q8N535 108 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 CDC26Q8NHZ8 85 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 C10orf105Q8TEF2 133 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 YPEL2Q96QA6 119 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 SERPINI1Q99574 410 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 PHB2Q99623 299 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 PRRT1Q99946 306 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 SH3BGRL3Q9H299 93 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 TRABDQ9H4I3 376 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 STOML2Q9UJZ1 356 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 PRNDQ9UKY0 176 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 RIMBP3CA6NJZ7 1639 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 RIMBP3BA6NNM3 1639 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 RIMBP3Q9UFD9 1639 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 MYOFQ9NZM1 2061 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 MIA2Q96PC5 1412 aa0.55□□□□□ -2.32
CHD9-204ENST00000561869 IGKV3-7A0A075B6H7 116 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 LOC110117498A0A087WWA1 95 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 TRGV10A0A0A0MS01 117 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 M0R378 163 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 TAX1BP3O14907 124 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 HMGB3O15347 200 aaKnown RBP0.54□□□□□ -2.32
CHD9-204ENST00000561869 ATG12O94817 140 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 PROSCO94903 275 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 SRP14P37108 136 aaKnown RBP0.54□□□□□ -2.32
CHD9-204ENST00000561869 RAB4BP61018 213 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 NCALDP61601 193 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 DYNLT1P63172 113 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 EIF5AP63241 154 aaKnown RBP0.54□□□□□ -2.32
CHD9-204ENST00000561869 POU6F1Q14863 301 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 ESRGQ1W209 222 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 DEFB113Q30KQ7 82 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 RNASE10Q5GAN6 216 aaKnown RBP0.54□□□□□ -2.32
CHD9-204ENST00000561869 TMED4Q7Z7H5 227 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 Q8IYB0 196 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 EXOC3-AS1Q8N2X6 119 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 OR2T10Q8NGZ9 312 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 STAG3L4Q8TBR4 150 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 TEX47Q8TBZ9 253 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 CANT1Q8WVQ1 401 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 AP3S1Q92572 193 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 CEP19Q96LK0 163 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 TEX37Q96LM6 180 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 LINC00467Q9BRT7 94 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 GINS3Q9BRX5 216 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 PRADC1Q9BSG0 188 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 CCDC94Q9BW85 323 aaPredicted RBP0.54□□□□□ -2.32
CHD9-204ENST00000561869 BCL2L10Q9HD36 194 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 C14orf132Q9NPU4 83 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 SLC35A3Q9Y2D2 325 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 UTP11Q9Y3A2 253 aaKnown RBP0.54□□□□□ -2.32
CHD9-204ENST00000561869 POLEQ07864 2286 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 OBSL1O75147 1896 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 MYH7BA7E2Y1 1941 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 EXPH5Q8NEV8 1989 aa0.54□□□□□ -2.32
CHD9-204ENST00000561869 TMEM238C9JI98 176 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 M0R2N4 97 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 GGCTO75223 188 aaKnown RBP0.53□□□□□ -2.32
CHD9-204ENST00000561869 HYPMO75409 117 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 IFNA1P01562 189 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 MGST1P10620 155 aaKnown RBP0.53□□□□□ -2.32
CHD9-204ENST00000561869 IL9P15248 144 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 BRS3P32247 399 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 RHOBP62745 196 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 RPL19P84098 196 aaKnown RBP0.53□□□□□ -2.32
CHD9-204ENST00000561869 C1orf137Q5JT78 98 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 PDZD9Q8IXQ8 264 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 SLC30A7Q8NEW0 376 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 ZNF418Q8TF45 676 aaPredicted RBP0.53□□□□□ -2.32
CHD9-204ENST00000561869 SFT2D1Q8WV19 159 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 PBOV1Q9GZY1 135 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 BOLA2Q9H3K6 86 aa0.53□□□□□ -2.32
CHD9-204ENST00000561869 LYRM2Q9NU23 88 aaPredicted RBP0.53□□□□□ -2.32
CHD9-204ENST00000561869 TNRC6BQ9UPQ9 1833 aaKnown RBP0.52□□□□□ -2.33
CHD9-204ENST00000561869 A0A087WX48 190 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 TRAV3A0A0B4J244 114 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 DUXBA0A1W2PPF3 345 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms