RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 SELENOTP62341 195 aa12.39□□□□□ -0.43
USB1-204ENST00000561568 NHLH2Q02577 135 aa12.39□□□□□ -0.43
USB1-204ENST00000561568 RAB31Q13636 194 aa12.39□□□□□ -0.43
USB1-204ENST00000561568 LCN12Q6JVE5 192 aa12.39□□□□□ -0.43
USB1-204ENST00000561568 LILRB2Q8N423 598 aa12.39□□□□□ -0.43
USB1-204ENST00000561568 NARS2Q96I59 477 aaKnown RBP12.39□□□□□ -0.43
USB1-204ENST00000561568 UQCC1Q9NVA1 299 aa12.39□□□□□ -0.43
USB1-204ENST00000561568 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
USB1-204ENST00000561568 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 IL4P05112 153 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 CD5P06127 495 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 CRYBB3P26998 211 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 RPL12P30050 165 aaKnown RBP12.38□□□□□ -0.43
USB1-204ENST00000561568 EWSR1Q01844 656 aaKnown RBP eCLIP12.38□□□□□ -0.43
USB1-204ENST00000561568 LAMTOR1Q6IAA8 161 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 Q6ZNX1 250 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 BPIFCQ8NFQ6 507 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 RHPN1-AS1Q9BWJ2 59 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 TMEM231Q9H6L2 316 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 MBD2Q9UBB5 411 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 MLXQ9UH92 298 aa12.38□□□□□ -0.43
USB1-204ENST00000561568 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
USB1-204ENST00000561568 TRAV25A0A0B4J276 109 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 CHEK1O14757 476 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 EDN2P20800 178 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 VWC2Q2TAL6 325 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
USB1-204ENST00000561568 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
USB1-204ENST00000561568 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 RNF125Q96EQ8 232 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
USB1-204ENST00000561568 LSM4Q9Y4Z0 139 aaKnown RBP12.37□□□□□ -0.43
USB1-204ENST00000561568 HNRNPCP07910 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
USB1-204ENST00000561568 S100A7P31151 101 aa12.36□□□□□ -0.43
USB1-204ENST00000561568 NUP62P37198 522 aaPredicted RBP12.36□□□□□ -0.43
USB1-204ENST00000561568 OR2F1Q13607 317 aa12.36□□□□□ -0.43
USB1-204ENST00000561568 BTNL8Q6UX41 500 aa12.36□□□□□ -0.43
USB1-204ENST00000561568 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
USB1-204ENST00000561568 OR2T35Q8NGX2 323 aa12.36□□□□□ -0.43
USB1-204ENST00000561568 GRAMD2BQ96HH9 432 aa12.36□□□□□ -0.43
USB1-204ENST00000561568 VSIRQ9H7M9 311 aa12.36□□□□□ -0.43
USB1-204ENST00000561568 GP9P14770 177 aa12.35□□□□□ -0.43
USB1-204ENST00000561568 DEFA6Q01524 100 aa12.35□□□□□ -0.43
USB1-204ENST00000561568 USF2Q15853 346 aaPredicted RBP12.35□□□□□ -0.43
USB1-204ENST00000561568 CHAC2Q8WUX2 184 aa12.35□□□□□ -0.43
USB1-204ENST00000561568 PBDC1Q9BVG4 233 aa12.35□□□□□ -0.43
USB1-204ENST00000561568 WDR83OSQ9Y284 106 aa12.35□□□□□ -0.43
USB1-204ENST00000561568 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
USB1-204ENST00000561568 U3KQE9 123 aa12.35□□□□□ -0.43
USB1-204ENST00000561568 CMYA5Q8N3K9 4069 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 IGHV3-49A0A0A0MS15 119 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 ZNF785A8K8V0 405 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 AGPAT2O15120 278 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 MPDU1O75352 247 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
USB1-204ENST00000561568 EIF2B2P49770 351 aaKnown RBP12.34□□□□□ -0.43
USB1-204ENST00000561568 LYZP61626 148 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 Q5BKY6 102 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 S100A7AQ86SG5 101 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 INO80EQ8NBZ0 244 aaPredicted RBP12.34□□□□□ -0.43
USB1-204ENST00000561568 RNF2Q99496 336 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 SLC45A2Q9UMX9 530 aa12.34□□□□□ -0.43
USB1-204ENST00000561568 IGHV3OR16-13A0A075B7E8 117 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 IGHV3-74A0A0B4J1X5 117 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 IZUMO1RA6ND01 250 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 TSPAN4O14817 238 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 DFFBO76075 338 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 GATA2P23769 480 aaPredicted RBP12.33□□□□□ -0.44
USB1-204ENST00000561568 CAMLGP49069 296 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 AP2S1P53680 142 aaPredicted RBP12.33□□□□□ -0.44
USB1-204ENST00000561568 PLP1P60201 277 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 PAFAH1B2P68402 229 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 GUCA2BQ16661 112 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 PXDC1Q5TGL8 231 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 TMEM182Q6ZP80 229 aaPredicted RBP12.33□□□□□ -0.44
USB1-204ENST00000561568 TMEM61Q8N0U2 210 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 ST8SIA2Q92186 375 aa12.33□□□□□ -0.44
USB1-204ENST00000561568 AURKAIP1Q9NWT8 199 aaPredicted RBP12.33□□□□□ -0.44
USB1-204ENST00000561568 BUB3O43684 328 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 ORM2P19652 201 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 CLINT1Q14677 625 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 C1orf194Q5T5A4 169 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 FAM90A2PQ658T7 463 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 Q6ZRG5 221 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 AQP10Q96PS8 301 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 MGST2Q99735 147 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 ATP5SQ99766 215 aa12.32□□□□□ -0.44
USB1-204ENST00000561568 SPAG8Q99932 426 aaPredicted RBP12.32□□□□□ -0.44
USB1-204ENST00000561568 IGHV3-66A0A0C4DH42 116 aa12.31□□□□□ -0.44
USB1-204ENST00000561568 UBE2L5PA0A1B0GUS4 154 aa12.31□□□□□ -0.44
USB1-204ENST00000561568 HYPMO75409 117 aa12.31□□□□□ -0.44
USB1-204ENST00000561568 IFNA5P01569 189 aa12.31□□□□□ -0.44
USB1-204ENST00000561568 PRB2P02812 416 aaPredicted RBP12.31□□□□□ -0.44
USB1-204ENST00000561568 LINC00869P0C866 280 aa12.31□□□□□ -0.44
USB1-204ENST00000561568 FGF7P21781 194 aa12.31□□□□□ -0.44
USB1-204ENST00000561568 RPL29P47914 159 aaKnown RBP12.31□□□□□ -0.44
USB1-204ENST00000561568 RPL11P62913 178 aaKnown RBP12.31□□□□□ -0.44
USB1-204ENST00000561568 C16orf54Q6UWD8 224 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms