RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 GPN1Q9HCN4 374 aaPredicted RBP7.59□□□□□ -1.19
HERC1-212ENST00000561348 RCL1Q9Y2P8 373 aaKnown RBP7.59□□□□□ -1.19
HERC1-212ENST00000561348 A0A1W2PS18 150 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 TSPAN4O14817 238 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 METTL15P1P0C7V9 234 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 PSG1P11464 419 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
HERC1-212ENST00000561348 GPX4P36969 197 aaPredicted RBP7.58□□□□□ -1.2
HERC1-212ENST00000561348 ATP5IP56385 69 aaPredicted RBP7.58□□□□□ -1.2
HERC1-212ENST00000561348 LYZP61626 148 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 ID3Q02535 119 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 ZNF90Q03938 601 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 HAGHQ16775 308 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 GSG1LQ6UXU4 331 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 APRG1Q8IVJ8 170 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 LILRB2Q8N423 598 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 OR4D5Q8NGN0 318 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 RCHY1Q96PM5 261 aa7.58□□□□□ -1.2
HERC1-212ENST00000561348 A0A1B0GVG6 124 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 INMT-MINDY4F8WBC2 141 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 GOSR2O14653 212 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 CCNKO75909 580 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 SIX6O95475 246 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 MBPP02686 304 aaPredicted RBP7.57□□□□□ -1.2
HERC1-212ENST00000561348 FABP1P07148 127 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 HNRNPCP07910 306 aaKnown RBP eCLIP7.57□□□□□ -1.2
HERC1-212ENST00000561348 P2RY1P47900 373 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 CAV2P51636 162 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 YPEL3P61236 119 aaPredicted RBP7.57□□□□□ -1.2
HERC1-212ENST00000561348 ZNF124Q15973 351 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 ACOT7LQ6ZUV0 252 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 ZNF414Q96IQ9 312 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 FAM110AQ9BQ89 295 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 RETNQ9HD89 108 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 C19orf73Q9NVV2 129 aa7.57□□□□□ -1.2
HERC1-212ENST00000561348 RBMY1BA6NDE4 496 aaKnown RBP7.56□□□□□ -1.2
HERC1-212ENST00000561348 RBMY1EA6NEQ0 496 aaKnown RBP7.56□□□□□ -1.2
HERC1-212ENST00000561348 SNRPGP15A8MWD9 76 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 LCE2BO14633 110 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 SSNA1O43805 119 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 TOMM40O96008 361 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 RBMY1DP0C7P1 496 aaKnown RBP7.56□□□□□ -1.2
HERC1-212ENST00000561348 GATA2P23769 480 aaPredicted RBP7.56□□□□□ -1.2
HERC1-212ENST00000561348 EIF2B2P49770 351 aaKnown RBP7.56□□□□□ -1.2
HERC1-212ENST00000561348 USF2Q15853 346 aaPredicted RBP7.56□□□□□ -1.2
HERC1-212ENST00000561348 LRRC37A5PQ49AS3 106 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 LEMD1Q68G75 181 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 OR10P1Q8NGE3 313 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 RNF125Q96EQ8 232 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 SMIM8Q96KF7 97 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 C2orf50Q96LR7 162 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 RAB40CQ96S21 281 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 MS4A6AQ9H2W1 248 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 DOK5Q9P104 306 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 MGAT4CQ9UBM8 478 aa7.56□□□□□ -1.2
HERC1-212ENST00000561348 LOC102724200A0A096LPH7 203 aaPredicted RBP7.55□□□□□ -1.2
HERC1-212ENST00000561348 ORM2P19652 201 aa7.55□□□□□ -1.2
HERC1-212ENST00000561348 PVALBP20472 110 aaPredicted RBP7.55□□□□□ -1.2
HERC1-212ENST00000561348 CRYBB3P26998 211 aa7.55□□□□□ -1.2
HERC1-212ENST00000561348 TMEM217Q8N7C4 229 aa7.55□□□□□ -1.2
HERC1-212ENST00000561348 SPATA25Q9BR10 227 aa7.55□□□□□ -1.2
HERC1-212ENST00000561348 VSIRQ9H7M9 311 aa7.55□□□□□ -1.2
HERC1-212ENST00000561348 IGKV1D-37A0A075B6S9 117 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 C7orf66A4D0T2 115 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 FAM24AA6NFZ4 105 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 K7EPK0 472 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 CST7O76096 145 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 IL5P05113 134 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 ZNF688P0C7X2 276 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 PAX9P55771 341 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 DEFB131AP59861 70 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 RAB32Q13637 225 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 ODF3L2Q3SX64 289 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 BPIFCQ8NFQ6 507 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 OR1B1Q8NGR6 318 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 WWC2-AS2Q96NR7 200 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 GGTLC1Q9BX51 225 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 SLC25A22Q9H936 323 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 PFDN2Q9UHV9 154 aa7.54□□□□□ -1.2
HERC1-212ENST00000561348 COL7A1Q02388 2944 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 IGKV1OR2-108A0A075B7D4 117 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 HELTA6NFD8 242 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 A8MZ25 164 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 TSC22D2O75157 780 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 CD5P06127 495 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 OR5G3P0C626 314 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 FAM90A2PQ658T7 463 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 Q6ZNX1 250 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 OR8I2Q8N0Y5 310 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 FAM24BQ8N5W8 94 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 TRGV9Q99603 122 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 MAP6D1Q9H9H5 199 aa7.53□□□□□ -1.2
HERC1-212ENST00000561348 PRAF2O60831 178 aa7.52□□□□□ -1.21
HERC1-212ENST00000561348 PFDN1O60925 122 aa7.52□□□□□ -1.21
HERC1-212ENST00000561348 RLN2P04090 185 aa7.52□□□□□ -1.21
HERC1-212ENST00000561348 AP2S1P53680 142 aaPredicted RBP7.52□□□□□ -1.21
HERC1-212ENST00000561348 APOC4P55056 127 aa7.52□□□□□ -1.21
HERC1-212ENST00000561348 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
HERC1-212ENST00000561348 FGL1Q08830 312 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms