RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 C9orf152Q5JTZ5 239 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 ASPHD1Q5U4P2 390 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 TEX38Q6PEX7 206 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 C8orf86Q6ZUL3 223 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 C5orf24Q7Z6I8 188 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 MOB3BQ86TA1 216 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 MRPL52Q86TS9 123 aaKnown RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 KLHL30-AS1Q8NEE0 82 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 OR52L2PQ8NGH6 319 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 OR5AN1Q8NGI8 311 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 RNASE11Q8TAA1 199 aaKnown RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 MRAPQ8TCY5 172 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 Q8WTZ3 238 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 C4orf3Q8WVX3 66 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BHQ93079 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 RAX2Q96IS3 184 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 PACRGQ96M98 296 aaPredicted RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BNQ99877 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 HIST1H2BMQ99879 126 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 RARRES2Q99969 163 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 PARP12Q9H0J9 701 aaKnown RBP5.36□□□□□ -1.55
SPG11-224ENST00000561268 NIT2Q9NQR4 276 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 CACNG5Q9UF02 275 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 LY96Q9Y6Y9 160 aa5.36□□□□□ -1.55
SPG11-224ENST00000561268 MAP1LC3B2A6NCE7 125 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 PMS2P5A8MQ11 134 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 F6UZH7 168 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 H0YJW9 148 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 ATP6V0E1O15342 81 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 NBR2O15453 112 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 IGKV1-5P01602 117 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 RPLP1P05386 114 aaKnown RBP5.35□□□□□ -1.55
SPG11-224ENST00000561268 METTL15P1P0C7V9 234 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 CNTFRP26992 372 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 CCL20P78556 96 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 SLC38A11Q08AI6 406 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 HNF4GQ14541 408 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 MMDQ15546 238 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 TMEM241Q24JQ0 296 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 KHDC1LQ5JSQ8 128 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 PRR18Q8N4B5 295 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 OR10P1Q8NGE3 313 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 ISOC2Q96AB3 205 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 MCRIP2Q9BUT9 160 aaKnown RBP5.35□□□□□ -1.55
SPG11-224ENST00000561268 ACTR3CQ9C0K3 210 aaPredicted RBP5.35□□□□□ -1.55
SPG11-224ENST00000561268 MAP1LC3BQ9GZQ8 125 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 SLC39A9Q9NUM3 307 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 LINC00527Q9UJ94 153 aa5.35□□□□□ -1.55
SPG11-224ENST00000561268 A0A0G2JRQ6 117 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 WI2-2373I1.2A0A1W2PRP0 233 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 ZNF727A8MUV8 499 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 PPP5D1E7EU14 171 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 FAM229AH3BQW9 127 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 CCL24O00175 119 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 GGCTO75223 188 aaKnown RBP5.34□□□□□ -1.55
SPG11-224ENST00000561268 HPRT1P00492 218 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 GCGP01275 180 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 PFN1P07737 140 aaKnown RBP5.34□□□□□ -1.55
SPG11-224ENST00000561268 CT45A6P0DMU7 189 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 CT45A5P0DMU8 189 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 CT45A7P0DMV0 189 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 NQO2P16083 231 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 RAB11AP62491 216 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 SSBP2P81877 361 aaPredicted RBP5.34□□□□□ -1.55
SPG11-224ENST00000561268 HAGHQ16775 308 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 BSXQ3C1V8 233 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 Q6ZRM9 215 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 TMEM183AQ8IXX5 376 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 ZFP82Q8N141 532 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 HIST3H2BBQ8N257 126 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 RPP25LQ8N5L8 163 aaKnown RBP5.34□□□□□ -1.55
SPG11-224ENST00000561268 TMEM217Q8N7C4 229 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 ZNF709Q8N972 641 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 OR51G1Q8NGK1 321 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 RITA1Q96K30 269 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 UBE2E2Q96LR5 201 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 OR5B12Q96R08 314 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 OR4C12Q96R67 309 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 RNF5Q99942 180 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 RASL11BQ9BPW5 248 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 PPP1R14DQ9NXH3 145 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 OR1A1Q9P1Q5 309 aa5.34□□□□□ -1.55
SPG11-224ENST00000561268 PCP4L1A6NKN8 68 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 NCBP2LA6PVI3 153 aaKnown RBP5.33□□□□□ -1.56
SPG11-224ENST00000561268 RRHO14718 337 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 BRI3O95415 125 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 HRASP01112 189 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 EGR2P11161 476 aaPredicted RBP5.33□□□□□ -1.56
SPG11-224ENST00000561268 OPRK1P41145 380 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 OR2B8PP59922 312 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 SPCS3P61009 180 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 SSTP61278 116 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 PKIAP61925 76 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 RPL19P84098 196 aaKnown RBP5.33□□□□□ -1.56
SPG11-224ENST00000561268 RELQ04864 619 aaPredicted RBP5.33□□□□□ -1.56
SPG11-224ENST00000561268 ZNF726P1Q15940 193 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 POU2AF1Q16633 256 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 RTL8BQ17RB0 113 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms